Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ADO50296.1KEGG: ent:Ent638_0313 hypothetical protein. (301 aa)    
Predicted Functional Partners:
ADO50297.1
KEGG: ent:Ent638_0312 hypothetical protein.
  
  
 0.891
ADO48159.1
KEGG: sed:SeD_A1321 flagellar motor protein MotA.
   
    0.549
ADO48071.1
PFAM: flagellar export chaperone; KEGG: ect:ECIAI39_1129 flagellar biosynthesis protein FliT.
   
    0.512
ADO48160.1
PFAM: OmpA/MotB domain protein; KEGG: ses:SARI_01018 flagellar motor protein MotB.
   
    0.505
ADO48072.1
KEGG: ecg:E2348C_2043 flagellar protein FliS; TIGRFAM: flagellar protein FliS; PFAM: flagellar protein FliS.
   
    0.494
ADO46914.1
TIGRFAM: PAS sensor protein; PFAM: chemotaxis sensory transducer; PAS fold-3 domain protein; histidine kinase HAMP region domain protein; KEGG: enc:ECL_04457 methyl-accepting chemotaxis sensory transducer; SMART: chemotaxis sensory transducer; PAC repeat-containing protein.
   
    0.462
Your Current Organism:
Enterobacter lignolyticus
NCBI taxonomy Id: 701347
Other names: Enterobacter lignolyticus SCF1, [. lignolyticus SCF1, [Enterobacter] lignolyticus SCF1
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