Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ADO50314.1PFAM: inner-membrane translocator; KEGG: kva:Kvar_4759 inner-membrane translocator; Belongs to the binding-protein-dependent transport system permease family. (336 aa)    
Predicted Functional Partners:
rbsA-2
ABC transporter related protein; Part of the ABC transporter complex RbsABC involved in ribose import. Responsible for energy coupling to the transport system. Belongs to the ABC transporter superfamily. Ribose importer (TC 3.A.1.2.1) family.
  
 0.996
rbsA
ABC transporter related protein; Part of the ABC transporter complex RbsABC involved in ribose import. Responsible for energy coupling to the transport system. Belongs to the ABC transporter superfamily. Ribose importer (TC 3.A.1.2.1) family.
  
 0.952
rbsA-3
ABC transporter related protein; Part of the ABC transporter complex RbsABC involved in ribose import. Responsible for energy coupling to the transport system. Belongs to the ABC transporter superfamily. Ribose importer (TC 3.A.1.2.1) family.
  
 0.952
ADO50407.1
Manually curated; PFAM: ABC transporter related; KEGG: pst:PSPTO_2368 ribose ABC transporter, ATP-binding protein; SMART: AAA ATPase.
  
 0.950
ADO46445.1
KEGG: spe:Spro_3929 ABC transporter-related protein; PFAM: ABC transporter related; SMART: AAA ATPase.
  
 0.949
ADO50315.1
PFAM: periplasmic binding protein/LacI transcriptional regulator; KEGG: enc:ECL_00343 ribose ABC superfamily ATP binding protein.
 
   
 0.925
xylG
D-xylose ABC transporter, ATPase subunit; Part of the ABC transporter complex XylFGH involved in xylose import. Responsible for energy coupling to the transport system. Belongs to the ABC transporter superfamily. Xylose importer (TC 3.A.1.2.4) family.
   
 0.901
ADO47473.1
KEGG: cro:ROD_24821 putative ABC transporter ATP-binding protein; PFAM: ABC transporter related; SMART: AAA ATPase.
   
 0.881
ADO46454.1
KEGG: kva:Kvar_0173 D-xylose ABC transporter, periplasmic substrate-binding protein; TIGRFAM: D-xylose ABC transporter, periplasmic substrate-binding protein; PFAM: periplasmic binding protein/LacI transcriptional regulator.
 
   
 0.781
ADO50631.1
PFAM: periplasmic binding protein/LacI transcriptional regulator; KEGG: efe:EFER_4050 D-ribose transporter subunit RbsB.
   
 0.774
Your Current Organism:
Enterobacter lignolyticus
NCBI taxonomy Id: 701347
Other names: Enterobacter lignolyticus SCF1, [. lignolyticus SCF1, [Enterobacter] lignolyticus SCF1
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