Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
ADO50316.1PFAM: protein of unknown function DUF1498; KEGG: enc:ECL_00341 hypothetical protein. (228 aa)    
Predicted Functional Partners:
ADO50318.1
PFAM: PfkB domain protein; KEGG: eok:G2583_4911 PfkB domain protein.
 
   
 0.939
xylB
Xylulokinase; KEGG: cro:ROD_42421 xylulose kinase; TIGRFAM: xylulokinase; PFAM: Carbohydrate kinase, FGGY-like.
    
  0.904
xylA
TIGRFAM: xylose isomerase; KEGG: enc:ECL_00201 xylose isomerase; PFAM: Xylose isomerase domain-containing protein TIM barrel; Belongs to the xylose isomerase family.
     
  0.900
ADO50317.1
TIGRFAM: ketose-bisphosphate aldolase; KEGG: ent:Ent638_0285 hypothetical protein; PFAM: ketose-bisphosphate aldolase class-II.
 
   
 0.845
ADO50312.1
KEGG: ent:Ent638_0290 integral membrane sensor hybrid histidine kinase; PFAM: ATP-binding region ATPase domain protein; histidine kinase HAMP region domain protein; histidine kinase A domain protein; response regulator receiver; SMART: ATP-binding region ATPase domain protein; histidine kinase HAMP region domain protein; histidine kinase A domain protein; response regulator receiver.
 
     0.764
ADO50315.1
PFAM: periplasmic binding protein/LacI transcriptional regulator; KEGG: enc:ECL_00343 ribose ABC superfamily ATP binding protein.
 
   
 0.745
ADO50314.1
PFAM: inner-membrane translocator; KEGG: kva:Kvar_4759 inner-membrane translocator; Belongs to the binding-protein-dependent transport system permease family.
 
   
 0.692
rbsA-2
ABC transporter related protein; Part of the ABC transporter complex RbsABC involved in ribose import. Responsible for energy coupling to the transport system. Belongs to the ABC transporter superfamily. Ribose importer (TC 3.A.1.2.1) family.
 
     0.629
Your Current Organism:
Enterobacter lignolyticus
NCBI taxonomy Id: 701347
Other names: Enterobacter lignolyticus SCF1, [. lignolyticus SCF1, [Enterobacter] lignolyticus SCF1
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