STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADO50318.1PFAM: PfkB domain protein; KEGG: eok:G2583_4911 PfkB domain protein. (337 aa)    
Predicted Functional Partners:
ADO50316.1
PFAM: protein of unknown function DUF1498; KEGG: enc:ECL_00341 hypothetical protein.
 
     0.929
ADO50317.1
TIGRFAM: ketose-bisphosphate aldolase; KEGG: ent:Ent638_0285 hypothetical protein; PFAM: ketose-bisphosphate aldolase class-II.
  
 0.925
ADO50315.1
PFAM: periplasmic binding protein/LacI transcriptional regulator; KEGG: enc:ECL_00343 ribose ABC superfamily ATP binding protein.
 
  
 0.759
ADO50312.1
KEGG: ent:Ent638_0290 integral membrane sensor hybrid histidine kinase; PFAM: ATP-binding region ATPase domain protein; histidine kinase HAMP region domain protein; histidine kinase A domain protein; response regulator receiver; SMART: ATP-binding region ATPase domain protein; histidine kinase HAMP region domain protein; histidine kinase A domain protein; response regulator receiver.
 
     0.657
ADO50314.1
PFAM: inner-membrane translocator; KEGG: kva:Kvar_4759 inner-membrane translocator; Belongs to the binding-protein-dependent transport system permease family.
 
     0.615
rbsD
RbsD or FucU transport; Catalyzes the interconversion of beta-pyran and beta-furan forms of D-ribose.
  
  
 0.554
rbsA-2
ABC transporter related protein; Part of the ABC transporter complex RbsABC involved in ribose import. Responsible for energy coupling to the transport system. Belongs to the ABC transporter superfamily. Ribose importer (TC 3.A.1.2.1) family.
       0.528
rbsK
Ribokinase; Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5-phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway.
  
     0.506
ADO47532.1
KEGG: enc:ECL_03800 5-deoxy-glucuronate isomerase.
  
  
 0.490
hisA
KEGG: kva:Kvar_1575 phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase; TIGRFAM: phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase; PFAM: histidine biosynthesis protein.
  
    0.472
Your Current Organism:
Enterobacter lignolyticus
NCBI taxonomy Id: 701347
Other names: Enterobacter lignolyticus SCF1, [. lignolyticus SCF1, [Enterobacter] lignolyticus SCF1
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