STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADO50328.1Transcriptional regulator, LysR family; PFAM: LysR substrate-binding; regulatory protein LysR; KEGG: cko:CKO_03821 hypothetical protein. (295 aa)    
Predicted Functional Partners:
ADO50327.1
PFAM: LrgA family protein; KEGG: set:SEN4041 hypothetical protein.
 
     0.865
ADO48820.1
Transcriptional regulator, LysR family; PFAM: LysR substrate-binding; regulatory protein LysR; KEGG: bcj:BCAL0776 LysR family regulatory protein; Belongs to the LysR transcriptional regulatory family.
  
     0.745
ADO50326.1
PFAM: LrgB family protein; KEGG: enc:ECL_00327 hypothetical protein.
 
    0.710
ADO47033.1
Transcriptional regulator, LysR family; PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: ent:Ent638_0144 LysR family transcriptional regulator.
  
     0.687
ADO47142.1
Transcriptional regulator, LysR family; PFAM: LysR substrate-binding; regulatory protein LysR; KEGG: cko:CKO_04518 DNA-binding transcriptional activator TdcA.
  
     0.674
ADO48288.1
Transcriptional regulator, LysR family; PFAM: LysR substrate-binding; regulatory protein LysR; KEGG: eic:NT01EI_2140 HTH-type transcriptional regulator PecT.
  
     0.666
ADO47701.1
Transcriptional regulator, LysR family; KEGG: efe:EFER_0881 DNA-binding transcriptional repressor of flagellar, motility and chemotaxis genes; manually curated; PFAM: LysR substrate-binding; regulatory protein LysR.
  
     0.622
ADO48425.1
Transcriptional regulator, LysR family; PFAM: LysR substrate-binding; regulatory protein LysR; KEGG: sbc:SbBS512_E1856 putative DNA-binding transcriptional regulator.
  
     0.609
ADO48590.1
Transcriptional regulator, LysR family; PFAM: LysR substrate-binding; regulatory protein LysR; KEGG: kva:Kvar_2459 transcriptional regulator, LysR family.
  
     0.583
ADO48478.1
Transcriptional regulator, LysR family; PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: ent:Ent638_1967 LysR family transcriptional regulator.
  
     0.443
Your Current Organism:
Enterobacter lignolyticus
NCBI taxonomy Id: 701347
Other names: Enterobacter lignolyticus SCF1, [. lignolyticus SCF1, [Enterobacter] lignolyticus SCF1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.