Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ADO50336.1KEGG: ent:Ent638_0265 EAL domain-containing protein; PFAM: EAL domain protein; SMART: EAL domain protein. (528 aa)    
Predicted Functional Partners:
ADO48482.1
TIGRFAM: diguanylate cyclase; PAS sensor protein; PFAM: GGDEF domain containing protein; PAS fold domain protein; KEGG: hch:HCH_02971 GGDEF domain-containing protein; SMART: GGDEF domain containing protein; PAS domain containing protein.
 
   
 0.970
ADO47026.1
TIGRFAM: diguanylate cyclase; PAS sensor protein; PFAM: GGDEF domain containing protein; PAS fold-3 domain protein; KEGG: ent:Ent638_3404 diguanylate cyclase with PAS/PAC sensor; SMART: GGDEF domain containing protein; PAC repeat-containing protein.
 
     0.935
ADO48696.1
TIGRFAM: diguanylate cyclase; PAS sensor protein; PFAM: GGDEF domain containing protein; PAS fold-4 domain protein; KEGG: cko:CKO_01413 hypothetical protein; SMART: GGDEF domain containing protein; PAS domain containing protein.
 
   
 0.839
ADO48051.1
TIGRFAM: diguanylate cyclase; PFAM: GGDEF domain containing protein; KEGG: sed:SeD_A1253 cellulose synthesis regulatory protein; SMART: GGDEF domain containing protein.
  
   
 0.831
ADO50002.1
TIGRFAM: diguanylate cyclase; PFAM: GGDEF domain containing protein; KEGG: kva:Kvar_4425 diguanylate cyclase; SMART: GGDEF domain containing protein.
 
   
 0.817
ADO47416.1
TIGRFAM: diguanylate cyclase; PFAM: GGDEF domain containing protein; histidine kinase HAMP region domain protein; KEGG: cro:ROD_25541 putative signal transduction protein; SMART: GGDEF domain containing protein.
 
   
 0.808
ADO49502.1
TIGRFAM: diguanylate cyclase; PFAM: GGDEF domain containing protein; KEGG: efe:EFER_1808 hypothetical protein; SMART: GGDEF domain containing protein.
  
   
 0.808
ADO49050.1
TIGRFAM: diguanylate cyclase; PFAM: GGDEF domain containing protein; KEGG: ecg:E2348C_1912 predicted diguanylate cyclase; SMART: GGDEF domain containing protein.
 
   
 0.807
ADO48442.1
TIGRFAM: diguanylate cyclase; PFAM: GGDEF domain containing protein; KEGG: kpu:KP1_3053 hypothetical protein; SMART: GGDEF domain containing protein.
  
   
 0.793
ADO48694.1
TIGRFAM: diguanylate cyclase; PFAM: GGDEF domain containing protein; KEGG: spe:Spro_4046 diguanylate cyclase; SMART: GGDEF domain containing protein.
 
   
 0.789
Your Current Organism:
Enterobacter lignolyticus
NCBI taxonomy Id: 701347
Other names: Enterobacter lignolyticus SCF1, [. lignolyticus SCF1, [Enterobacter] lignolyticus SCF1
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