STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
psiEPFAM: Phosphate-starvation-inducible E-like; KEGG: enc:ECL_00283 phosphate-starvation-inducible protein PsiE. (136 aa)    
Predicted Functional Partners:
ADO50012.1
PFAM: Protein of unknown function DUF2501; KEGG: cko:CKO_03439 hypothetical protein.
  
     0.635
ADO50261.1
Virulence-related outer membrane protein; KEGG: eic:NT01EI_3043 hypothetical protein; manually curated; PFAM: virulence-related outer membrane protein.
  
     0.620
ADO48083.1
PFAM: Protein of unknown function DUF2594; KEGG: kva:Kvar_1694 protein of unknown function DUF2594.
  
     0.607
arnF
Hypothetical protein; Translocates 4-amino-4-deoxy-L-arabinose-phosphoundecaprenol (alpha-L-Ara4N-phosphoundecaprenol) from the cytoplasmic to the periplasmic side of the inner membrane; Belongs to the ArnF family.
  
     0.603
ADO50184.1
PFAM: protein of unknown function DUF1107; KEGG: enc:ECL_00614 hypothetical protein.
  
   
 0.603
ADO49255.1
PFAM: virulence-related outer membrane protein; KEGG: ses:SARI_02093 outer membrane protein X.
  
     0.583
ADO48203.1
PFAM: DNA polymerase II beta subunit; KEGG: enc:ECL_01454 DNA polymerase III subunit theta.
  
     0.582
ADO50371.1
PFAM: protein of unknown function DUF1017; KEGG: ecx:EcHS_A4267 hypothetical protein.
       0.572
secM
Secretion monitor family proten; Regulates secA expression by translational coupling of the secM secA operon. Translational pausing at a specific Pro residue 5 residues before the end of the protein may allow disruption of a mRNA repressor helix that normally suppresses secA translation initiation. Belongs to the SecM family.
  
     0.555
ADO48196.1
TIGRFAM: 2-dehydro-3-deoxyphosphogluconate aldolase/4-hydroxy-2-oxoglutarate aldolase; KEGG: kva:Kvar_1744 2-dehydro-3-deoxyphosphogluconate aldolase/4-hydroxy-2-oxoglutarate aldolase; PFAM: KDPG and KHG aldolase.
      
 0.554
Your Current Organism:
Enterobacter lignolyticus
NCBI taxonomy Id: 701347
Other names: Enterobacter lignolyticus SCF1, [. lignolyticus SCF1, [Enterobacter] lignolyticus SCF1
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