Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
ADO50407.1Manually curated; PFAM: ABC transporter related; KEGG: pst:PSPTO_2368 ribose ABC transporter, ATP-binding protein; SMART: AAA ATPase. (509 aa)    
Predicted Functional Partners:
ADO50406.1
PFAM: inner-membrane translocator; KEGG: bgl:bglu_1g18660 inner-membrane translocator; Belongs to the binding-protein-dependent transport system permease family.
 
  0.992
ADO49628.1
PFAM: inner-membrane translocator; KEGG: ebr:ECB_02651 ribose transport system permease protein RbsC.
 0.987
ADO50408.1
KEGG: bge:BC1002_1679 periplasmic binding protein/LacI transcriptional regulator; manually curated; PFAM: periplasmic binding protein/LacI transcriptional regulator.
 
 0.987
ADO50632.1
PFAM: inner-membrane translocator; KEGG: enc:ECL_05131 ribose transport system permease protein.
 0.986
ADO46444.1
PFAM: inner-membrane translocator; KEGG: spe:Spro_3930 monosaccharide-transporting ATPase; Belongs to the binding-protein-dependent transport system permease family.
 
 0.979
ADO50314.1
PFAM: inner-membrane translocator; KEGG: kva:Kvar_4759 inner-membrane translocator; Belongs to the binding-protein-dependent transport system permease family.
  
 0.950
ADO47472.1
PFAM: inner-membrane translocator; KEGG: cro:ROD_24831 putative ABC transporter membrane protein; Belongs to the binding-protein-dependent transport system permease family.
 
 
 0.923
ADO47528.1
PFAM: inner-membrane translocator; KEGG: enc:ECL_03804 ribose transport system permease protein.
 
 0.844
ADO48155.1
PFAM: inner-membrane translocator; KEGG: kpu:KP1_3525 L-arabinose transporter permease protein; Belongs to the binding-protein-dependent transport system permease family.
 
 
 0.833
ADO46892.1
PFAM: inner-membrane translocator; KEGG: kpu:KP1_4803 putative ABC transport system permease component.
 
 0.826
Your Current Organism:
Enterobacter lignolyticus
NCBI taxonomy Id: 701347
Other names: Enterobacter lignolyticus SCF1, [. lignolyticus SCF1, [Enterobacter] lignolyticus SCF1
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