close STRING v12.5 is now available!
The next version of STRING is ready for use in your analyses: updated networks across STRING • newly available directed regulatory networks • a new typed view showing functional, physical, and regulatory edges in one network • new clustering options and cluster-based layouts • … and much more!
Explore STRING v12.5 →
STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADO50442.1Manually curated; TIGRFAM: carboxylate/amino acid/amine transporter; KEGG: ent:Ent638_3969 carboxylate/amino acid/amine transporter; PFAM: protein of unknown function DUF6 transmembrane. (299 aa)    
Predicted Functional Partners:
ADO50180.1
PFAM: protein of unknown function DUF490; KEGG: cko:CKO_03609 hypothetical protein.
  
     0.594
ADO50443.1
Manually curated; PFAM: EAL domain protein; KEGG: cko:CKO_02697 hypothetical protein; SMART: EAL domain protein.
       0.506
ADO49887.1
Transcriptional regulator, LacI family; TIGRFAM: D-fructose-responsive transcription factor; PFAM: regulatory protein LacI; periplasmic binding protein/LacI transcriptional regulator; KEGG: ses:SARI_02884 DNA-binding transcriptional regulator FruR; SMART: regulatory protein LacI.
  
     0.471
ADO46979.1
Manually curated; PFAM: SH3 type 3 domain protein; KEGG: kpu:KP1_4746 putative signal transduction protein; SMART: SH3 domain protein.
  
   
 0.443
ADO49163.1
PFAM: protein of unknown function DUF340 membrane; KEGG: ses:SARI_02024 hypothetical protein.
  
     0.435
Your Current Organism:
Enterobacter lignolyticus
NCBI taxonomy Id: 701347
Other names: Enterobacter lignolyticus SCF1, [. lignolyticus SCF1, [Enterobacter] lignolyticus SCF1
Server load: low (38%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.