Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ADO50510.1PFAM: protein of unknown function DUF1422; KEGG: cko:CKO_03028 hypothetical protein. (119 aa)    
Predicted Functional Partners:
fabR
Regulatory protein TetR; Represses the transcription of fabB, involved in unsaturated fatty acid (UFA) biosynthesis. By controlling UFA production, FabR directly influences the physical properties of the membrane bilayer.
  
    0.840
ADO49724.1
KEGG: enc:ECL_01069 fermentation/respiration switch protein; Belongs to the UPF0255 family.
  
     0.772
ADO47072.1
KEGG: cko:CKO_04333 hypothetical protein.
  
     0.759
ADO47454.1
TIGRFAM: HAD superfamily (subfamily IF) hydrolase, YfhB; KEGG: cko:CKO_00223 hypothetical protein.
  
     0.757
ADO47696.1
PFAM: YfbU family protein; KEGG: kpu:KP1_3931 hypothetical protein; Belongs to the UPF0304 family.
  
     0.757
secM
Secretion monitor family proten; Regulates secA expression by translational coupling of the secM secA operon. Translational pausing at a specific Pro residue 5 residues before the end of the protein may allow disruption of a mRNA repressor helix that normally suppresses secA translation initiation. Belongs to the SecM family.
  
     0.757
ADO47591.1
PFAM: protein of unknown function DUF1131; KEGG: efe:EFER_0740 hypothetical protein.
  
     0.756
ADO48787.1
KEGG: enc:ECL_02427 putative regulatory protein.
  
     0.755
ADO49848.1
PFAM: Uncharacterised conserved protein UCP006287; KEGG: enc:ECL_00919 hypothetical protein; Belongs to the UPF0231 family.
  
     0.755
ADO49332.1
Cyd operon protein YbgE; KEGG: enc:ECL_02996 hypothetical protein; TIGRFAM: cyd operon protein YbgE; PFAM: Cyd operon protein YbgE.
  
     0.749
Your Current Organism:
Enterobacter lignolyticus
NCBI taxonomy Id: 701347
Other names: Enterobacter lignolyticus SCF1, [. lignolyticus SCF1, [Enterobacter] lignolyticus SCF1
Server load: low (40%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.