STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADO50533.1PFAM: protein of unknown function DUF6 transmembrane; KEGG: eoj:ECO26_4641 putative permease. (304 aa)    
Predicted Functional Partners:
ADO48843.1
KEGG: kpn:KPN_01215 ABC transporter membrane protein.
  
     0.549
ADO46404.1
PFAM: O-antigen polymerase; KEGG: ctu:Ctu_41260 hypothetical protein.
  
     0.517
katG
Catalase/peroxidase HPI; Bifunctional enzyme with both catalase and broad-spectrum peroxidase activity; Belongs to the peroxidase family. Peroxidase/catalase subfamily.
       0.511
ADO47759.1
Signal transduction histidine kinase, nitrogen specific, NtrB; TIGRFAM: PAS sensor protein; PFAM: ATP-binding region ATPase domain protein; PAS fold domain protein; histidine kinase HAMP region domain protein; histidine kinase A domain protein; KEGG: cko:CKO_00550 sensory histidine kinase AtoS; SMART: ATP-binding region ATPase domain protein; histidine kinase A domain protein; PAS domain containing protein.
  
     0.497
ADO46857.1
Transcriptional regulator, LysR family; PFAM: LysR substrate-binding; regulatory protein LysR; KEGG: set:SEN3086 DNA-binding transcriptional activator TdcA.
  
    0.433
ADO48847.1
PFAM: Carboxymuconolactone decarboxylase; KEGG: cro:ROD_13001 putative decarboxylase.
  
    0.422
ADO49019.1
KEGG: etr:ETAE_1758 glucose-1-phosphatase/inositol phosphatase; PFAM: histidine acid phosphatase.
  
     0.415
Your Current Organism:
Enterobacter lignolyticus
NCBI taxonomy Id: 701347
Other names: Enterobacter lignolyticus SCF1, [. lignolyticus SCF1, [Enterobacter] lignolyticus SCF1
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