STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADO50558.1PFAM: nucleoside recognition domain protein; KEGG: ses:SARI_03062 hypothetical protein. (153 aa)    
Predicted Functional Partners:
ADO50557.1
PFAM: nucleoside recognition domain protein; KEGG: sew:SeSA_A4770 transporter gate domain protein.
 
  
 0.986
ADO50559.1
Isoaspartyl dipeptidase; Catalyzes the hydrolytic cleavage of a subset of L- isoaspartyl (L-beta-aspartyl) dipeptides. Used to degrade proteins damaged by L-isoaspartyl residues formation.
 
    0.896
ADO50560.1
Transcriptional regulator, LysR family; PFAM: LysR substrate-binding; regulatory protein LysR; KEGG: set:SEN4272 putative DNA-binding transcriptional regulator.
 
    0.731
ADO46761.1
Anaerobic c4-dicarboxylate antiporter, DcuC family; KEGG: ebr:ECB_03087 putative cryptic C4-dicarboxylate transporter DcuD; TIGRFAM: anaerobic c4-dicarboxylate antiporter, DcuC family; PFAM: C4-dicarboxylate anaerobic carrier-like.
  
     0.702
ADO48284.1
KEGG: pmr:PMI0625 C4-dicarboxylate transporter; TIGRFAM: anaerobic c4-dicarboxylate antiporter, DcuC family; PFAM: C4-dicarboxylate anaerobic carrier-like.
  
     0.586
ADO47905.1
KEGG: cro:ROD_21811 putative colanic acid biosynthesis pyruvyl transferase.
  
     0.540
ADO49081.1
PFAM: Protein of unknown function DUF2057; KEGG: sew:SeSA_A1140 hypothetical protein; Belongs to the UPF0319 family.
  
     0.520
ADO49420.1
KEGG: efe:EFER_2482 C4-dicarboxylate transporter DcuC; TIGRFAM: anaerobic c4-dicarboxylate antiporter, DcuC family; PFAM: C4-dicarboxylate anaerobic carrier-like.
  
     0.491
ADO47574.1
Cob(I)yrinic acid a,c-diamide adenosyltransferase; KEGG: cko:CKO_00336 hypothetical protein; PFAM: cobalamin adenosyltransferase.
  
     0.461
ADO50274.1
PFAM: Tetratricopeptide TPR_1 repeat-containing protein; KEGG: ebr:ECB_00522 bacteriophage N4 receptor, outer membrane subunit.
  
     0.444
Your Current Organism:
Enterobacter lignolyticus
NCBI taxonomy Id: 701347
Other names: Enterobacter lignolyticus SCF1, [. lignolyticus SCF1, [Enterobacter] lignolyticus SCF1
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