STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADO50560.1Transcriptional regulator, LysR family; PFAM: LysR substrate-binding; regulatory protein LysR; KEGG: set:SEN4272 putative DNA-binding transcriptional regulator. (302 aa)    
Predicted Functional Partners:
ADO50557.1
PFAM: nucleoside recognition domain protein; KEGG: sew:SeSA_A4770 transporter gate domain protein.
 
     0.743
ADO50558.1
PFAM: nucleoside recognition domain protein; KEGG: ses:SARI_03062 hypothetical protein.
 
    0.731
ADO50559.1
Isoaspartyl dipeptidase; Catalyzes the hydrolytic cleavage of a subset of L- isoaspartyl (L-beta-aspartyl) dipeptides. Used to degrade proteins damaged by L-isoaspartyl residues formation.
 
    0.723
ADO46429.1
Transcriptional regulator, LysR family; PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: enc:ECL_00178 LysR family transcriptional regulator.
  
    0.677
ADO47142.1
Transcriptional regulator, LysR family; PFAM: LysR substrate-binding; regulatory protein LysR; KEGG: cko:CKO_04518 DNA-binding transcriptional activator TdcA.
  
     0.675
ADO47033.1
Transcriptional regulator, LysR family; PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: ent:Ent638_0144 LysR family transcriptional regulator.
  
    0.660
ADO46303.1
Transcriptional regulator, LysR family; KEGG: cko:CKO_00019 DNA-binding transcriptional regulator DsdC; TIGRFAM: D-serine deaminase transcriptional activator; PFAM: LysR substrate-binding; regulatory protein LysR.
  
     0.658
ADO47107.1
Transcriptional regulator, LysR family; PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: ses:SARI_04581 hypothetical protein.
  
     0.652
ADO50562.1
Transcriptional regulator, LysR family; PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: cko:CKO_03052 hypothetical protein.
  
     0.648
ADO49966.1
Transcriptional regulator, LysR family; PFAM: LysR substrate-binding; regulatory protein LysR; KEGG: vex:VEA_001290 transcriptional regulator LysR family protein.
  
     0.612
Your Current Organism:
Enterobacter lignolyticus
NCBI taxonomy Id: 701347
Other names: Enterobacter lignolyticus SCF1, [. lignolyticus SCF1, [Enterobacter] lignolyticus SCF1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.