STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
rhaTL-rhamnose-proton symporter, RhaT family, DMT superfamily; Uptake of L-rhamnose across the boundary membrane with the concomitant transport of protons into the cell (symport system). Belongs to the L-rhamnose transporter (TC 2.A.7.6) family. (344 aa)    
Predicted Functional Partners:
rhaM
L-rhamnose 1-epimerase; Involved in the anomeric conversion of L-rhamnose.
 
   
 0.628
rhaB
Rhamnulokinase; Involved in the catabolism of L-rhamnose (6-deoxy-L-mannose). Catalyzes the transfer of the gamma-phosphate group from ATP to the 1- hydroxyl group of L-rhamnulose to yield L-rhamnulose 1-phosphate. Belongs to the rhamnulokinase family.
 
  
 0.627
rhaA
TIGRFAM: L-rhamnose isomerase; KEGG: kva:Kvar_5006 L-rhamnose isomerase; PFAM: L-rhamnose isomerase.
 
  
 0.554
ADO49316.1
ABC transporter related protein; KEGG: kpu:KP1_1718 putative molybdenum transport ATP-binding protein ModF; PFAM: ABC transporter related; SMART: AAA ATPase.
  
     0.534
tsgA
PFAM: major facilitator superfamily MFS_1; KEGG: enc:ECL_04740 putative MFS transporter.
  
     0.527
rhaR
Transcriptional regulator, AraC family; Activates expression of the rhaSR operon in response to L- rhamnose.
 
  
 0.503
ADO46555.1
PFAM: Protein of unknown function DUF2500; KEGG: kva:Kvar_0268 protein of unknown function DUF2500.
  
     0.489
ADO48799.1
PFAM: SmpA/OmlA domain-containing protein; KEGG: ent:Ent638_1705 DNA-binding transcriptional activator OsmE.
  
     0.485
ADO46880.1
D-galactonate transporter; KEGG: esa:ESA_03504 hypothetical protein; TIGRFAM: d-galactonate transporter; PFAM: major facilitator superfamily MFS_1.
  
    0.476
ADO49340.1
PFAM: major facilitator superfamily MFS_1; KEGG: ccs:CCNA_01039 hexuronate transporter.
  
    0.474
Your Current Organism:
Enterobacter lignolyticus
NCBI taxonomy Id: 701347
Other names: Enterobacter lignolyticus SCF1, [. lignolyticus SCF1, [Enterobacter] lignolyticus SCF1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.