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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADO50593.1PFAM: branched-chain amino acid transport; KEGG: cko:CKO_03109 hypothetical protein. (107 aa)    
Predicted Functional Partners:
ADO50592.1
PFAM: AzlC family protein; KEGG: ent:Ent638_4080 AzlC family protein.
 
   
 0.955
ADO50591.1
Helix-turn-helix domain protein; KEGG: kva:Kvar_5020 transcriptional regulator, XRE family; PFAM: helix-turn-helix domain protein; SMART: helix-turn-helix domain protein.
 
   
 0.909
ADO48133.1
KEGG: enc:ECL_01712 GP18; TIGRFAM: phage minor tail protein L; PFAM: minor tail protein L.
  
     0.647
ADO48134.1
NLP/P60 protein; KEGG: enc:ECL_01713 GP19; PFAM: NLP/P60 protein; SMART: Mov34/MPN/PAD-1 family protein.
  
     0.621
ADO48136.1
PFAM: lambda tail assembly I; KEGG: eta:ETA_24210 putative phage tail assembly protein.
  
     0.587
ADO48137.1
PFAM: protein of unknown function DUF1983; Fibronectin type III domain protein; KEGG: ent:Ent638_2219 fibronectin, type III domain-containing protein.
  
     0.564
ADO47414.1
KEGG: esa:ESA_00652 hypothetical protein.
  
     0.538
ADO50241.1
Transcriptional regulator, LuxR family; KEGG: cro:ROD_32121 transcriptional regulatory protein EntR (entericidin R); PFAM: regulatory protein LuxR; SMART: regulatory protein LuxR.
  
     0.499
ADO48132.1
PFAM: minor tail family protein; KEGG: enc:ECL_01711 GP17.
  
     0.497
ADO49455.1
PFAM: MbtH domain protein; KEGG: cro:ROD_05951 enterochelin esterase (ferric enterobactin esterase).
  
     0.457
Your Current Organism:
Enterobacter lignolyticus
NCBI taxonomy Id: 701347
Other names: Enterobacter lignolyticus SCF1, [. lignolyticus SCF1, [Enterobacter] lignolyticus SCF1
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