STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
vapCPilT protein domain protein; Toxic component of a toxin-antitoxin (TA) system. An RNase. Belongs to the PINc/VapC protein family. (123 aa)    
Predicted Functional Partners:
ADO50602.1
KEGG: cko:CKO_03122 hypothetical protein.
 
 
   0.969
ADO49013.1
Delta-1-pyrroline-5-carboxylate dehydrogenase; Oxidizes proline to glutamate for use as a carbon and nitrogen source; Belongs to the aldehyde dehydrogenase family. In the N-terminal section; belongs to the proline dehydrogenase family.
 
 
   0.600
ADO49064.1
KEGG: spe:Spro_2383 CopG/DNA-binding domain-containing protein.
   
   0.534
ADO49271.1
PFAM: Fimbrial protein domain-containing protein; KEGG: cko:CKO_02327 hypothetical protein.
  
     0.505
ADO50603.1
Thioesterase domain protein; KEGG: cko:CKO_03124 hypothetical protein; TIGRFAM: thioesterase domain protein; PFAM: Thioesterase putative; GCN5-related N-acetyltransferase.
       0.497
dtd
D-tyrosyl-tRNA(Tyr) deacylase; An aminoacyl-tRNA editing enzyme that deacylates mischarged D-aminoacyl-tRNAs. Also deacylates mischarged glycyl-tRNA(Ala), protecting cells against glycine mischarging by AlaRS. Acts via tRNA- based rather than protein-based catalysis; rejects L-amino acids rather than detecting D-amino acids in the active site. By recycling D- aminoacyl-tRNA to D-amino acids and free tRNA molecules, this enzyme counteracts the toxicity associated with the formation of D-aminoacyl- tRNA entities in vivo and helps enforce protein L-homochirality. Belongs to the DTD family.
       0.430
ADO50605.1
Ribonuclease BN; KEGG: ecg:E2348C_4187 ribonuclease BN; TIGRFAM: ribonuclease BN; PFAM: ribonuclease BN.
       0.430
ADO50606.1
KEGG: ent:Ent638_4093 phosphatase; TIGRFAM: HAD-superfamily hydrolase, subfamily IA, variant 3; PFAM: Haloacid dehalogenase domain protein hydrolase.
       0.430
ADO47349.1
PFAM: protein of unknown function DUF955; KEGG: bxe:Bxe_A0212 hypothetical protein.
  
  
 0.405
Your Current Organism:
Enterobacter lignolyticus
NCBI taxonomy Id: 701347
Other names: Enterobacter lignolyticus SCF1, [. lignolyticus SCF1, [Enterobacter] lignolyticus SCF1
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