STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADO50609.1PFAM: major facilitator superfamily MFS_1; KEGG: eoh:ECO103_4297 putative transporter. (421 aa)    
Predicted Functional Partners:
ADO50610.1
PFAM: Xylose isomerase domain-containing protein TIM barrel; KEGG: ect:ECIAI39_3127 putative sugar phosphate isomerase.
 
    0.913
ADO50274.1
PFAM: Tetratricopeptide TPR_1 repeat-containing protein; KEGG: ebr:ECB_00522 bacteriophage N4 receptor, outer membrane subunit.
  
     0.755
ADO50611.1
Transcriptional regulator, GntR family; KEGG: eoj:ECO26_4718 putative DNA-binding transcriptional regulator; PFAM: regulatory protein GntR HTH; UbiC transcription regulator-associated domain-containing protein; SMART: regulatory protein GntR HTH.
 
    0.742
ADO50275.1
KEGG: ssn:SSON_0513 hypothetical protein.
  
     0.661
ADO46988.1
PFAM: Fimbrial protein domain-containing protein; KEGG: Yqi fimbriae subunit YgiL.
  
     0.524
ADO46349.1
Transcriptional regulator, LysR family; PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: eum:ECUMN_0355 putative DNA-binding transcriptional regulator.
  
    0.504
ADO50078.1
PFAM: regulatory protein DeoR; KEGG: ddc:Dd586_2893 regulatory protein DeoR.
  
   
 0.483
ADO46961.1
KEGG: ddc:Dd586_2893 regulatory protein DeoR.
  
   
 0.476
ADO47107.1
Transcriptional regulator, LysR family; PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: ses:SARI_04581 hypothetical protein.
  
    0.469
ADO50273.1
PFAM: General secretory system II protein E domain protein; KEGG: eok:G2583_0723 bacteriophage N4 adsorption protein B.
  
     0.464
Your Current Organism:
Enterobacter lignolyticus
NCBI taxonomy Id: 701347
Other names: Enterobacter lignolyticus SCF1, [. lignolyticus SCF1, [Enterobacter] lignolyticus SCF1
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