Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Score
ADO50611.1Transcriptional regulator, GntR family; KEGG: eoj:ECO26_4718 putative DNA-binding transcriptional regulator; PFAM: regulatory protein GntR HTH; UbiC transcription regulator-associated domain-containing protein; SMART: regulatory protein GntR HTH. (236 aa)    
Predicted Functional Partners:
ADO50610.1
PFAM: Xylose isomerase domain-containing protein TIM barrel; KEGG: ect:ECIAI39_3127 putative sugar phosphate isomerase.
 
    0.973
ADO50609.1
PFAM: major facilitator superfamily MFS_1; KEGG: eoh:ECO103_4297 putative transporter.
 
    0.752
ADO49984.1
Transcriptional regulator, XRE family; TIGRFAM: nicotinamide-nucleotide adenylyltransferase; cytidyltransferase-related domain protein; PFAM: helix-turn-helix domain protein; KEGG: cro:ROD_49131 transcriptional regulator; SMART: helix-turn-helix domain protein.
   
  
 0.691
ADO47858.1
Transcriptional regulator, GntR family; KEGG: cko:CKO_00682 hypothetical protein; PFAM: UbiC transcription regulator-associated domain-containing protein; regulatory protein GntR HTH; SMART: regulatory protein GntR HTH.
  
     0.598
ADO50274.1
PFAM: Tetratricopeptide TPR_1 repeat-containing protein; KEGG: ebr:ECB_00522 bacteriophage N4 receptor, outer membrane subunit.
  
     0.548
ADO50612.1
KEGG: kpu:KP1_0031 GTP-binding protein; TIGRFAM: GTP-binding protein TypA; small GTP-binding protein; PFAM: protein synthesis factor GTP-binding; elongation factor Tu domain 2 protein; elongation factor G domain-containing protein.
       0.459
ADO49516.1
Transcriptional regulator, AraC family; KEGG: ecp:ECP_4361 DNA-binding transcriptional regulator MelR; PFAM: helix-turn-helix- domain containing protein AraC type; SMART: Helix-turn-helix, AraC domain.
  
    0.441
ADO46295.1
Transcriptional regulator, AraC family; KEGG: cko:CKO_00027 hypothetical protein; PFAM: helix-turn-helix- domain containing protein AraC type; SMART: Helix-turn-helix, AraC domain.
  
    0.438
ADO47759.1
Signal transduction histidine kinase, nitrogen specific, NtrB; TIGRFAM: PAS sensor protein; PFAM: ATP-binding region ATPase domain protein; PAS fold domain protein; histidine kinase HAMP region domain protein; histidine kinase A domain protein; KEGG: cko:CKO_00550 sensory histidine kinase AtoS; SMART: ATP-binding region ATPase domain protein; histidine kinase A domain protein; PAS domain containing protein.
  
     0.424
ADO46431.1
Transcriptional regulator, CadC; PFAM: transcriptional regulator domain-containing protein; KEGG: efe:EFER_2778 putative regulatory protein.
  
     0.417
Your Current Organism:
Enterobacter lignolyticus
NCBI taxonomy Id: 701347
Other names: Enterobacter lignolyticus SCF1, [. lignolyticus SCF1, [Enterobacter] lignolyticus SCF1
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