Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
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[Homology]
Score
viaASMART: von Willebrand factor type A; KEGG: sew:SeSA_A4090 hypothetical protein. (483 aa)    
Predicted Functional Partners:
ADO50636.1
KEGG: kpu:KP1_0005 regulatory ATPase RavA; PFAM: ATPase associated with various cellular activities AAA_5; SMART: AAA ATPase.
 
  
 0.976
ADO50184.1
PFAM: protein of unknown function DUF1107; KEGG: enc:ECL_00614 hypothetical protein.
  
     0.771
ADO48766.1
PFAM: Protein of unknown function DUF2498; KEGG: kva:Kvar_3045 protein of unknown function DUF2498.
  
     0.753
zapC
Protein of unknown function DUF1379; Contributes to the efficiency of the cell division process by stabilizing the polymeric form of the cell division protein FtsZ. Acts by promoting interactions between FtsZ protofilaments and suppressing the GTPase activity of FtsZ.
  
     0.753
crl
Transcriptional regulator Crl; Binds to the sigma-S subunit of RNA polymerase, activating expression of sigma-S-regulated genes. Stimulates RNA polymerase holoenzyme formation and may bind to several other sigma factors, such as sigma-70 and sigma-32; Belongs to the Crl family.
  
     0.753
ADO48083.1
PFAM: Protein of unknown function DUF2594; KEGG: kva:Kvar_1694 protein of unknown function DUF2594.
  
     0.748
ADO48934.1
PFAM: protein of unknown function UPF0227; KEGG: ent:Ent638_1623 hypothetical protein; Belongs to the UPF0227 family.
  
     0.733
ADO48380.1
PFAM: LPP repeat-containing protein; KEGG: kpu:KP1_3230 murein lipoprotein.
  
     0.732
ADO48203.1
PFAM: DNA polymerase II beta subunit; KEGG: enc:ECL_01454 DNA polymerase III subunit theta.
  
     0.731
ADO50643.1
PFAM: ATP synthase I chain; KEGG: kva:Kvar_5075 ATP synthase I chain.
  
     0.727
Your Current Organism:
Enterobacter lignolyticus
NCBI taxonomy Id: 701347
Other names: Enterobacter lignolyticus SCF1, [. lignolyticus SCF1, [Enterobacter] lignolyticus SCF1
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