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STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
yidZTranscriptional regulator, LysR family; Involved in anaerobic NO protection. (326 aa)    
Predicted Functional Partners:
ADO50668.1
PFAM: major facilitator superfamily MFS_1; KEGG: cko:CKO_00054 multidrug efflux system protein MdtL.
 
    0.911
ADO50669.1
PFAM: periplasmic solute binding protein; KEGG: ent:Ent638_1111 periplasmic solute binding protein; Belongs to the bacterial solute-binding protein 9 family.
       0.486
ADO50670.1
KEGG: ent:Ent638_1112 ABC transporter related; PFAM: ABC transporter related; SMART: AAA ATPase.
       0.486
ADO50671.1
PFAM: ABC-3 protein; KEGG: ent:Ent638_1113 ABC-3 protein.
       0.486
ADO50672.1
PFAM: ABC-3 protein; KEGG: ent:Ent638_1114 ABC-3 protein.
       0.486
ADO46897.1
PFAM: alpha-L-rhamnosidase; KEGG: eoh:ECO103_3825 putative glycosyl hydrolase.
  
     0.476
ADO50666.1
KEGG: ses:SARI_03800 hypothetical protein.
  
    0.473
ADO50665.1
PFAM: NADPH-dependent FMN reductase; KEGG: ses:SARI_03799 hypothetical protein.
     
 0.472
ADO49171.1
Chitinase; PFAM: glycoside hydrolase family 19; PKD domain containing protein; Carbohydrate-binding family V/XII; KEGG: cko:CKO_02215 hypothetical protein; SMART: Carbohydrate-binding family V/XII; PKD domain containing protein.
  
     0.438
ADO50067.1
PFAM: protein of unknown function DUF1398; KEGG: sec:SC1853 putative cytoplasmic protein.
  
     0.430
Your Current Organism:
Enterobacter lignolyticus
NCBI taxonomy Id: 701347
Other names: Enterobacter lignolyticus SCF1, [. lignolyticus SCF1, [Enterobacter] lignolyticus SCF1
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