Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
ADO50670.1KEGG: ent:Ent638_1112 ABC transporter related; PFAM: ABC transporter related; SMART: AAA ATPase. (275 aa)    
Predicted Functional Partners:
ADO50669.1
PFAM: periplasmic solute binding protein; KEGG: ent:Ent638_1111 periplasmic solute binding protein; Belongs to the bacterial solute-binding protein 9 family.
 
 
 0.999
ADO50671.1
PFAM: ABC-3 protein; KEGG: ent:Ent638_1113 ABC-3 protein.
 
 0.999
ADO50672.1
PFAM: ABC-3 protein; KEGG: ent:Ent638_1114 ABC-3 protein.
 
 0.998
ADO48187.1
PFAM: ABC-3 protein; KEGG: kpu:KP1_3504 high-affinity zinc transporter membrane component.
 
 
 0.891
ADO48189.1
PFAM: periplasmic solute binding protein; KEGG: ent:Ent638_2426 high-affinity zinc transporter periplasmic component.
 
  
 0.852
ADO50673.1
PFAM: bifunctional deaminase-reductase domain protein; KEGG: pol:Bpro_0286 bifunctional deaminase-reductase-like.
       0.558
ADO50356.1
Ferric uptake regulator, Fur family; PFAM: ferric-uptake regulator; KEGG: kpu:KP1_0287 zinc uptake transcriptional repressor; Belongs to the Fur family.
  
  
 0.511
ADO50668.1
PFAM: major facilitator superfamily MFS_1; KEGG: cko:CKO_00054 multidrug efflux system protein MdtL.
  
    0.494
yidZ
Transcriptional regulator, LysR family; Involved in anaerobic NO protection.
       0.486
fur
Ferric uptake regulator, Fur family; PFAM: ferric-uptake regulator; KEGG: set:SEN0657 ferric uptake regulator; Belongs to the Fur family.
  
  
 0.477
Your Current Organism:
Enterobacter lignolyticus
NCBI taxonomy Id: 701347
Other names: Enterobacter lignolyticus SCF1, [. lignolyticus SCF1, [Enterobacter] lignolyticus SCF1
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