STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
pduDPropanediol dehydratase medium subunit. (244 aa)    
Predicted Functional Partners:
pduE
Propanediol dehydratase small subunit.
 
 0.999
pduC
Propanediol dehydratase large subunit.
 0.999
pduH
Diol dehydratase-reactivating factor, small subunit.
 
  
 0.985
pduP
CoA-dependent propionaldehyde dehydrogenase.
 
 
 0.978
pduB
Propanediol utilization protein PduB.
 
  
 0.978
pduG
Diol dehydratase-reactivating factor, large subunit.
 
  
 0.975
pduQ
Propanol dehydrogenase.
  
 
 0.957
pduK
Propanediol utilization protein PduK.
 
  
 0.931
pduObis
Propanediol utilization protein PduObis.
 
  
 0.925
dhaT
1,3-propanediol dehydrogenase.
  
 
 0.909
Your Current Organism:
Pediococcus claussenii
NCBI taxonomy Id: 701521
Other names: P. claussenii ATCC BAA-344, Pediococcus claussenii ATCC BAA-344, Pediococcus claussenii ATCC str. BAA-344, Pediococcus claussenii ATCC strain BAA-344
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.