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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PECL_1663Glycosyl hydrolases 31 family protein. (731 aa)    
Predicted Functional Partners:
PECL_1710
Alpha amylase, catalytic domain protein.
  
 
 0.921
malL
Oligo-1,6-glucosidase.
  
 
 0.921
PECL_1502
Aldose 1-epimerase family protein; Catalyzes the interconversion of alpha and beta anomers of maltose.
  
 
  0.908
galT
Galactose-1-phosphate uridyl transferase, N-terminal domain protein.
 
  
 0.775
galK
Galactokinase; Catalyzes the transfer of the gamma-phosphate of ATP to D- galactose to form alpha-D-galactose-1-phosphate (Gal-1-P). Belongs to the GHMP kinase family. GalK subfamily.
 
  
 0.729
PECL_1664
Transcriptional regulator, LacI family.
 
    0.617
PECL_1700
Multiple sugar ABC transporter, permease protein 1.
  
  
 0.513
PECL_1667
PTS system, glucose subfamily, IIABC protein.
  
  
 0.484
PECL_1665
GIY-YIG catalytic domain protein.
       0.449
treB
PTS system, trehalose-specific IIABC component.
 
  
 0.423
Your Current Organism:
Pediococcus claussenii
NCBI taxonomy Id: 701521
Other names: P. claussenii ATCC BAA-344, Pediococcus claussenii ATCC BAA-344, Pediococcus claussenii ATCC str. BAA-344, Pediococcus claussenii ATCC strain BAA-344
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