STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PECL_970Hypothetical protein. (101 aa)    
Predicted Functional Partners:
PECL_601
Phage prohead protease, HK97 family.
  
     0.576
PECL_1784
Transcription regulator, Crp family.
  
     0.461
PECL_969
Hypothetical protein.
       0.461
PECL_644
Hypothetical protein.
  
     0.459
PECL_596
Phage terminase, small subunit, P27 family.
  
     0.439
PECL_599
Prophage Lp3 protein 17, portal protein.
  
     0.439
PECL_597
Phage Terminase family protein.
  
     0.429
Your Current Organism:
Pediococcus claussenii
NCBI taxonomy Id: 701521
Other names: P. claussenii ATCC BAA-344, Pediococcus claussenii ATCC BAA-344, Pediococcus claussenii ATCC str. BAA-344, Pediococcus claussenii ATCC strain BAA-344
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.