STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_001270745_00304Unannotated protein. (187 aa)    
Predicted Functional Partners:
GCA_001270745_00305
Unannotated protein.
 
 
 0.999
GCA_001270745_00300
Unannotated protein.
 
  
 0.979
GCA_001270745_00303
Unannotated protein.
 
  
 0.975
GCA_001270745_00298
Unannotated protein.
 
  
 0.951
GCA_001270745_05093
Unannotated protein.
 
 
 
 0.944
GCA_001270745_00306
Unannotated protein.
 
  
 0.844
GCA_001270745_00301
Unannotated protein.
       0.833
GCA_001270745_00302
Unannotated protein.
       0.833
GCA_001270745_00299
Unannotated protein.
 
    0.831
GCA_001270745_00297
Unannotated protein.
       0.784
Your Current Organism:
Jiangella muralis
NCBI taxonomy Id: 702383
Other names: CCM 7680, DSM 45357, J. muralis, JCM 17970, Jiangella muralis Kampfer et al. 2011, Jiangella sp. 15-Je-017, strain 15-Je-017
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.