Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
EHG25004.1Hypothetical protein. (219 aa)    
Predicted Functional Partners:
EHG26017.1
Hypothetical protein.
 
      0.900
EHG25005.1
Hypothetical protein.
 
     0.793
EHG25951.1
Formate acetyltransferase.
  
 
 0.750
EHG25237.1
Pyruvate-flavodoxin oxidoreductase.
     
 0.630
EHG24753.1
Hypothetical protein.
  
 
 0.625
EHG25007.1
Hypothetical protein.
   
   0.593
queF
NADPH-dependent 7-cyano-7-deazaguanine reductase; Catalyzes the NADPH-dependent reduction of 7-cyano-7- deazaguanine (preQ0) to 7-aminomethyl-7-deazaguanine (preQ1). Belongs to the GTP cyclohydrolase I family. QueF type 1 subfamily.
       0.570
pheT
phenylalanyl-tRNA synthetase, beta subunit; Belongs to the phenylalanyl-tRNA synthetase beta subunit family. Type 1 subfamily.
 
     0.565
pheS
phenylalanyl-tRNA synthetase, alpha subunit; Belongs to the class-II aminoacyl-tRNA synthetase family. Phe-tRNA synthetase alpha subunit type 1 subfamily.
       0.486
EHG24788.1
Hypothetical protein.
 
     0.482
Your Current Organism:
Selenomonas noxia
NCBI taxonomy Id: 702437
Other names: S. noxia F0398, Selenomonas noxia F0398, Selenomonas noxia str. F0398, Selenomonas noxia strain F0398
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