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STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EHG24501.1Hypothetical protein. (173 aa)    
Predicted Functional Partners:
cas2
CRISPR-associated protein cas2; CRISPR (clustered regularly interspaced short palindromic repeat), is an adaptive immune system that provides protection against mobile genetic elements (viruses, transposable elements and conjugative plasmids). CRISPR clusters contain sequences complementary to antecedent mobile elements and target invading nucleic acids. CRISPR clusters are transcribed and processed into CRISPR RNA (crRNA). Functions as a ssRNA-specific endoribonuclease. Involved in the integration of spacer DNA into the CRISPR cassette.
 
 
 0.986
EHG23344.1
CRISPR-associated protein cas4; CRISPR (clustered regularly interspaced short palindromic repeat) is an adaptive immune system that provides protection against mobile genetic elements (viruses, transposable elements and conjugative plasmids). CRISPR clusters contain sequences complementary to antecedent mobile elements and target invading nucleic acids. CRISPR clusters are transcribed and processed into CRISPR RNA (crRNA). Belongs to the CRISPR-associated exonuclease Cas4 family.
 
 
 
 0.888
EHG24502.1
Csm1 family CRISPR-associated protein.
 
  
 0.885
EHG24505.1
Hypothetical protein.
 
     0.883
EHG24507.1
CRISPR-associated protein cas6.
 
  
 0.882
EHG24506.1
Hypothetical protein.
 
     0.868
EHG24503.1
Hypothetical protein.
 
     0.858
EHG24504.1
Csm3 family CRISPR-associated ramp protein.
 
     0.851
EHG24508.1
Hypothetical protein.
       0.609
EHG23514.1
DNA-binding protein HU-1; Histone-like DNA-binding protein which is capable of wrapping DNA to stabilize it, and thus to prevent its denaturation under extreme environmental conditions.
    
   0.521
Your Current Organism:
Selenomonas noxia
NCBI taxonomy Id: 702437
Other names: S. noxia F0398, Selenomonas noxia F0398, Selenomonas noxia str. F0398, Selenomonas noxia strain F0398
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.