STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CUW_0548Hypothetical protein; Identified by glimmer; putative. (64 aa)    
Predicted Functional Partners:
CUW_0549
Hypothetical protein; Identified by glimmer; putative.
       0.661
CUW_0547
Hypothetical protein; Identified by glimmer; putative.
       0.613
CUW_0550
Hypothetical protein; Identified by glimmer; putative.
       0.467
CUW_0551
Holin.
       0.467
CUW_0552
N-acetylmuramoyl-L-alanine amidase; Identified by match to protein family HMM PF01510; match to protein family HMM PF05036.
       0.467
CUW_0546
Conserved hypothetical protein.
       0.401
Your Current Organism:
Turicibacter sanguinis
NCBI taxonomy Id: 702450
Other names: T. sanguinis PC909, Turicibacter sanguinis PC909, Turicibacter sanguinis str. PC909, Turicibacter sanguinis strain PC909, Turicibacter sp. PC909
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.