STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CUW_0942Efflux ABC transporter, permease protein; Identified by match to protein family HMM PF02687. (669 aa)    
Predicted Functional Partners:
CUW_0941
ABC transporter, ATP-binding protein; Identified by match to protein family HMM PF00005.
 0.986
CUW_0871
ATPase/histidine kinase/DNA gyrase B/HSP90 domain protein; Identified by match to protein family HMM PF00512; match to protein family HMM PF02518.
 
  
 0.834
CUW_0239
Putative bacteriocin ABC transporter; Identified by match to protein family HMM PF00005.
 
 0.833
CUW_0940
Putative membrane protein.
 
     0.788
CUW_0872
Response regulator receiver domain protein; Identified by match to protein family HMM PF00072; match to protein family HMM PF00486.
 
    0.739
CUW_1028
ABC transporter, ATP-binding protein; Identified by match to protein family HMM PF00005; match to protein family HMM PF02687.
 
 0.699
CUW_1253
ABC transporter, ATP-binding protein; Identified by match to protein family HMM PF00005.
 
 0.681
CUW_0238
ATPase/histidine kinase/DNA gyrase B/HSP90 domain protein; Identified by match to protein family HMM PF02518.
 
  
 0.658
CUW_1699
ABC transporter, ATP-binding protein; Identified by match to protein family HMM PF00005.
  
 0.639
CUW_0339
ABC transporter, ATP-binding protein; Identified by match to protein family HMM PF00005.
  
 0.634
Your Current Organism:
Turicibacter sanguinis
NCBI taxonomy Id: 702450
Other names: T. sanguinis PC909, Turicibacter sanguinis PC909, Turicibacter sanguinis str. PC909, Turicibacter sanguinis strain PC909, Turicibacter sp. PC909
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.