Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| CUW_0158 | CUW_1203 | CUW_0158 | CUW_1203 | Glycosyltransferase, group 2 family protein; An automated process has identified a potential problem with this gene model; the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model; the current gene model (or a revised gene model) may contain a premature stop; identified by match to protein family HMM PF00535. | Polysaccharide deacetylase; Identified by match to protein family HMM PF01522. | 0.403 |
| CUW_0158 | pilZ | CUW_0158 | CUW_0159 | Glycosyltransferase, group 2 family protein; An automated process has identified a potential problem with this gene model; the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model; the current gene model (or a revised gene model) may contain a premature stop; identified by match to protein family HMM PF00535. | Type IV pilus assembly protein; An automated process has identified a potential problem with this gene model; the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model; the current gene model (or a revised gene model) may contain a premature stop; identified by match to protein family HMM PF07238. | 0.987 |
| CUW_0642 | CUW_1203 | CUW_0642 | CUW_1203 | Glycosyltransferase, group 2 family protein; Identified by match to protein family HMM PF00535. | Polysaccharide deacetylase; Identified by match to protein family HMM PF01522. | 0.403 |
| CUW_1203 | CUW_0158 | CUW_1203 | CUW_0158 | Polysaccharide deacetylase; Identified by match to protein family HMM PF01522. | Glycosyltransferase, group 2 family protein; An automated process has identified a potential problem with this gene model; the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model; the current gene model (or a revised gene model) may contain a premature stop; identified by match to protein family HMM PF00535. | 0.403 |
| CUW_1203 | CUW_0642 | CUW_1203 | CUW_0642 | Polysaccharide deacetylase; Identified by match to protein family HMM PF01522. | Glycosyltransferase, group 2 family protein; Identified by match to protein family HMM PF00535. | 0.403 |
| CUW_1203 | CUW_1204 | CUW_1203 | CUW_1204 | Polysaccharide deacetylase; Identified by match to protein family HMM PF01522. | Monogalactosyldiacylglycerol synthase, C-terminal domain protein; Identified by match to protein family HMM PF06925. | 0.834 |
| CUW_1203 | CUW_1498 | CUW_1203 | CUW_1498 | Polysaccharide deacetylase; Identified by match to protein family HMM PF01522. | Glycosyl hydrolase family 25; Identified by match to protein family HMM PF01183; match to protein family HMM PF01476. | 0.497 |
| CUW_1203 | CUW_1995 | CUW_1203 | CUW_1995 | Polysaccharide deacetylase; Identified by match to protein family HMM PF01522. | Glycosyltransferase, group 2 family protein; Identified by match to protein family HMM PF00535. | 0.618 |
| CUW_1203 | mprF-2 | CUW_1203 | CUW_1202 | Polysaccharide deacetylase; Identified by match to protein family HMM PF01522. | Putative membrane protein; Catalyzes the transfer of a lysyl group from L-lysyl- tRNA(Lys) to membrane-bound phosphatidylglycerol (PG), which produces lysylphosphatidylglycerol (LPG), a major component of the bacterial membrane with a positive net charge. LPG synthesis contributes to bacterial virulence as it is involved in the resistance mechanism against cationic antimicrobial peptides (CAMP) produces by the host's immune system (defensins, cathelicidins) and by the competing microorganisms. | 0.786 |
| CUW_1203 | pilZ | CUW_1203 | CUW_0159 | Polysaccharide deacetylase; Identified by match to protein family HMM PF01522. | Type IV pilus assembly protein; An automated process has identified a potential problem with this gene model; the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model; the current gene model (or a revised gene model) may contain a premature stop; identified by match to protein family HMM PF07238. | 0.403 |
| CUW_1204 | CUW_1203 | CUW_1204 | CUW_1203 | Monogalactosyldiacylglycerol synthase, C-terminal domain protein; Identified by match to protein family HMM PF06925. | Polysaccharide deacetylase; Identified by match to protein family HMM PF01522. | 0.834 |
| CUW_1204 | mprF-2 | CUW_1204 | CUW_1202 | Monogalactosyldiacylglycerol synthase, C-terminal domain protein; Identified by match to protein family HMM PF06925. | Putative membrane protein; Catalyzes the transfer of a lysyl group from L-lysyl- tRNA(Lys) to membrane-bound phosphatidylglycerol (PG), which produces lysylphosphatidylglycerol (LPG), a major component of the bacterial membrane with a positive net charge. LPG synthesis contributes to bacterial virulence as it is involved in the resistance mechanism against cationic antimicrobial peptides (CAMP) produces by the host's immune system (defensins, cathelicidins) and by the competing microorganisms. | 0.906 |
| CUW_1498 | CUW_1203 | CUW_1498 | CUW_1203 | Glycosyl hydrolase family 25; Identified by match to protein family HMM PF01183; match to protein family HMM PF01476. | Polysaccharide deacetylase; Identified by match to protein family HMM PF01522. | 0.497 |
| CUW_1995 | CUW_1203 | CUW_1995 | CUW_1203 | Glycosyltransferase, group 2 family protein; Identified by match to protein family HMM PF00535. | Polysaccharide deacetylase; Identified by match to protein family HMM PF01522. | 0.618 |
| mprF-2 | CUW_1203 | CUW_1202 | CUW_1203 | Putative membrane protein; Catalyzes the transfer of a lysyl group from L-lysyl- tRNA(Lys) to membrane-bound phosphatidylglycerol (PG), which produces lysylphosphatidylglycerol (LPG), a major component of the bacterial membrane with a positive net charge. LPG synthesis contributes to bacterial virulence as it is involved in the resistance mechanism against cationic antimicrobial peptides (CAMP) produces by the host's immune system (defensins, cathelicidins) and by the competing microorganisms. | Polysaccharide deacetylase; Identified by match to protein family HMM PF01522. | 0.786 |
| mprF-2 | CUW_1204 | CUW_1202 | CUW_1204 | Putative membrane protein; Catalyzes the transfer of a lysyl group from L-lysyl- tRNA(Lys) to membrane-bound phosphatidylglycerol (PG), which produces lysylphosphatidylglycerol (LPG), a major component of the bacterial membrane with a positive net charge. LPG synthesis contributes to bacterial virulence as it is involved in the resistance mechanism against cationic antimicrobial peptides (CAMP) produces by the host's immune system (defensins, cathelicidins) and by the competing microorganisms. | Monogalactosyldiacylglycerol synthase, C-terminal domain protein; Identified by match to protein family HMM PF06925. | 0.906 |
| pilZ | CUW_0158 | CUW_0159 | CUW_0158 | Type IV pilus assembly protein; An automated process has identified a potential problem with this gene model; the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model; the current gene model (or a revised gene model) may contain a premature stop; identified by match to protein family HMM PF07238. | Glycosyltransferase, group 2 family protein; An automated process has identified a potential problem with this gene model; the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model; the current gene model (or a revised gene model) may contain a premature stop; identified by match to protein family HMM PF00535. | 0.987 |
| pilZ | CUW_1203 | CUW_0159 | CUW_1203 | Type IV pilus assembly protein; An automated process has identified a potential problem with this gene model; the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model; the current gene model (or a revised gene model) may contain a premature stop; identified by match to protein family HMM PF07238. | Polysaccharide deacetylase; Identified by match to protein family HMM PF01522. | 0.403 |