STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CUW_1575ABC transporter, permease protein; Identified by match to protein family HMM PF00528. (222 aa)    
Predicted Functional Partners:
CUW_1194
Putative D-methionine-binding lipoprotein MetQ; Identified by match to protein family HMM PF03180; Belongs to the nlpA lipoprotein family.
 0.999
CUW_1574
NLPA lipoprotein; Identified by match to protein family HMM PF03180; Belongs to the nlpA lipoprotein family.
 0.999
metN-2
ABC transporter, ATP-binding protein; Part of the ABC transporter complex MetNIQ involved in methionine import. Responsible for energy coupling to the transport system.
 0.999
metN
ABC transporter, ATP-binding protein; Part of the ABC transporter complex MetNIQ involved in methionine import. Responsible for energy coupling to the transport system.
 0.996
CUW_1193
ABC transporter, permease protein; Identified by match to protein family HMM PF00528.
  
  
 
0.907
CUW_1755
ABC transporter, permease protein; An automated process has identified a potential problem with this gene model; the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model; the current gene model (or a revised gene model) may contain a frame shift; identified by match to protein family HMM PF00528; match to protein family HMM TIGR01726.
    
 0.521
CUW_2546
ABC transporter, permease protein; Identified by match to protein family HMM PF00528.
   
 
  0.456
CUW_2605
Putative spermidine/putrescine transport system permease protein PotC; Identified by match to protein family HMM PF00528.
   
 
  0.456
CUW_2344
Putative maltose transport system permease protein MalG; Identified by match to protein family HMM PF00528.
   
 
  0.447
CUW_2545
ABC transporter, ATP-binding protein; Identified by match to protein family HMM PF00005; match to protein family HMM PF08402; Belongs to the ABC transporter superfamily.
 
 
 
  0.439
Your Current Organism:
Turicibacter sanguinis
NCBI taxonomy Id: 702450
Other names: T. sanguinis PC909, Turicibacter sanguinis PC909, Turicibacter sanguinis str. PC909, Turicibacter sanguinis strain PC909, Turicibacter sp. PC909
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.