STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CUW_1584Glycosyltransferase family 28 C-terminal domain protein; Identified by match to protein family HMM PF04101. (156 aa)    
Predicted Functional Partners:
CUW_1585
Identified by match to protein family HMM PF08660.
 
   
 0.957
CUW_1583
Putative membrane protein.
       0.752
yfhO
Bacterial membrane protein; This gene contains a nucleotide ambiguity which may be the result of a sequencing error; identified by match to protein family HMM PF09586.
 
     0.723
CUW_1582
Putative membrane protein.
       0.716
CUW_1589
Putative membrane protein.
 
   
 0.592
CUW_1590
Glycosyltransferase, group 1 family protein; Identified by match to protein family HMM PF00534.
 
   
 0.583
CUW_1594
Putative membrane protein.
 
   
 0.582
CUW_0862
Putative undecaprenyl-phosphate N-acetylglucosaminyl 1-phosphate transferase; Identified by match to protein family HMM PF00953.
   
 0.564
mraY
phospho-N-acetylmuramoyl-pentapeptide- transferase; First step of the lipid cycle reactions in the biosynthesis of the cell wall peptidoglycan; Belongs to the glycosyltransferase 4 family. MraY subfamily.
   
 0.563
CUW_1586
Hypothetical protein; Identified by glimmer; putative.
       0.558
Your Current Organism:
Turicibacter sanguinis
NCBI taxonomy Id: 702450
Other names: T. sanguinis PC909, Turicibacter sanguinis PC909, Turicibacter sanguinis str. PC909, Turicibacter sanguinis strain PC909, Turicibacter sp. PC909
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.