Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Neighborhood
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Co-expression
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[Homology]
Score
CUW_1986Resolvase, N-terminal domain protein; Identified by match to protein family HMM PF00239; match to protein family HMM PF07508. (536 aa)    
Predicted Functional Partners:
CUW_1985
Hypothetical protein; Identified by glimmer; putative.
  
    0.777
CUW_1921
Resolvase, N-terminal domain protein; Identified by match to protein family HMM PF00239.
 
     0.682
CUW_1934
Relaxase/mobilization nuclease domain protein; Identified by match to protein family HMM PF03432.
 
   
 0.545
CUW_1935
Conserved hypothetical protein; Identified by match to protein family HMM PF05713.
  
  
 0.513
CUW_2515
Identified by match to protein family HMM PF02534.
 
    0.506
CUW_1361
Antioxidant, AhpC/TSA family; Identified by match to protein family HMM PF00578; match to protein family HMM PF02683; match to protein family HMM PF08534.
  
    0.468
CUW_2512
Orf26 family protein.
 
    0.459
CUW_2513
Anticodon nuclease activator family protein.
  
     0.408
Your Current Organism:
Turicibacter sanguinis
NCBI taxonomy Id: 702450
Other names: T. sanguinis PC909, Turicibacter sanguinis PC909, Turicibacter sanguinis str. PC909, Turicibacter sanguinis strain PC909, Turicibacter sp. PC909
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