Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
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[Homology]
Score
CUW_1995Glycosyltransferase, group 2 family protein; Identified by match to protein family HMM PF00535. (413 aa)    
Predicted Functional Partners:
pdaA
Delta-lactam-biosynthetic de-N-acetylase; Identified by match to protein family HMM PF01522; match to protein family HMM TIGR02884.
  
 0.921
CUW_0232
Polysaccharide deacetylase; Identified by match to protein family HMM PF01522.
  
 0.788
CUW_0808
ATPase/histidine kinase/DNA gyrase B/HSP90 domain protein; Identified by match to protein family HMM PF00512; match to protein family HMM PF02518.
  
 
 0.780
CUW_1993
Nucleotide sugar dehydrogenase; Identified by match to protein family HMM PF00984; match to protein family HMM PF03720; match to protein family HMM PF03721; match to protein family HMM TIGR03026.
  
  
 0.712
CUW_1994
Bacterial sugar transferase; Identified by match to protein family HMM PF02397.
  
  
 0.676
CUW_1948
Polysaccharide deacetylase; Identified by match to protein family HMM PF01522.
  
 0.672
CUW_1517
Diguanylate cyclase (GGDEF) domain protein; Identified by match to protein family HMM PF00990; match to protein family HMM PF01590; match to protein family HMM TIGR00254.
  
 
 0.631
CUW_0863
ATPase/histidine kinase/DNA gyrase B/HSP90 domain protein; Identified by match to protein family HMM PF00072; match to protein family HMM PF00512; match to protein family HMM PF01627; match to protein family HMM PF02518.
 
 
 0.601
CUW_2326
Conserved hypothetical protein.
  
 
 0.568
soj
Sporulation initiation inhibitor protein Soj; Identified by match to protein family HMM PF01656.
  
 
 0.568
Your Current Organism:
Turicibacter sanguinis
NCBI taxonomy Id: 702450
Other names: T. sanguinis PC909, Turicibacter sanguinis PC909, Turicibacter sanguinis str. PC909, Turicibacter sanguinis strain PC909, Turicibacter sp. PC909
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