Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
CUW_1997Identified by match to protein family HMM PF04002; match to protein family HMM TIGR00608; Belongs to the UPF0758 family. (149 aa)    
Predicted Functional Partners:
CUW_1939
Conserved hypothetical protein; Identified by match to protein family HMM PF06114.
      0.807
maf
Septum formation protein Maf; Nucleoside triphosphate pyrophosphatase that hydrolyzes dTTP and UTP. May have a dual role in cell division arrest and in preventing the incorporation of modified nucleotides into cellular nucleic acids.
  
  
 0.623
mreC
Rod shape-determining protein MreC; Involved in formation and maintenance of cell shape.
  
  
 0.617
CUW_0808
ATPase/histidine kinase/DNA gyrase B/HSP90 domain protein; Identified by match to protein family HMM PF00512; match to protein family HMM PF02518.
  
    0.604
CUW_1996
Hypothetical protein; Identified by glimmer; putative.
       0.578
CUW_1998
Hypothetical protein; Identified by glimmer; putative.
       0.518
CUW_0590
Putative DNA protecting protein DprA; Identified by match to protein family HMM PF02481.
   
  
 0.421
CUW_1995
Glycosyltransferase, group 2 family protein; Identified by match to protein family HMM PF00535.
  
    0.416
CUW_2612
DNA internalization-related competence protein ComEC/Rec2; Identified by match to protein family HMM PF00753; match to protein family HMM PF03772; match to protein family HMM TIGR00360; match to protein family HMM TIGR00361.
  
  
 0.409
Your Current Organism:
Turicibacter sanguinis
NCBI taxonomy Id: 702450
Other names: T. sanguinis PC909, Turicibacter sanguinis PC909, Turicibacter sanguinis str. PC909, Turicibacter sanguinis strain PC909, Turicibacter sp. PC909
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