Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
CUW_2153Conserved hypothetical protein; Identified by match to protein family HMM PF07050; Belongs to the UPF0342 family. (133 aa)    
Predicted Functional Partners:
CUW_2117
Conserved hypothetical protein; Belongs to the UPF0342 family.
    
 
 0.807
CUW_2154
Conserved hypothetical protein.
  
    0.795
CUW_1075
Ferredoxin family protein; This gene contains a nucleotide ambiguity which may be the result of a sequencing error.
  
     0.756
CUW_2151
Conserved hypothetical protein.
 
     0.737
gerQ
Spore coat protein GerQ; Identified by match to protein family HMM TIGR02728.
  
     0.722
sspI
Small, acid-soluble spore protein I; Identified by match to protein family HMM TIGR03092; Belongs to the SspI family.
  
     0.689
CUW_2844
Conserved hypothetical protein.
  
     0.671
CUW_1908
Septum formation initiator; Identified by match to protein family HMM PF04977.
  
     0.654
CUW_1466
Putative lipoprotein.
  
     0.625
CUW_2152
Conserved hypothetical protein.
       0.608
Your Current Organism:
Turicibacter sanguinis
NCBI taxonomy Id: 702450
Other names: T. sanguinis PC909, Turicibacter sanguinis PC909, Turicibacter sanguinis str. PC909, Turicibacter sanguinis strain PC909, Turicibacter sp. PC909
Server load: low (12%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.