Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
CUW_2163Conserved hypothetical protein; Identified by match to protein family HMM PF06824. (430 aa)    
Predicted Functional Partners:
CUW_2164
Glycosyl hydrolase family 38 N-terminal domain protein; Identified by match to protein family HMM PF01074; match to protein family HMM PF07748.
  
 0.980
CUW_2167
Bacterial extracellular solute-binding protein; Identified by match to protein family HMM PF01547.
 
   
 0.860
CUW_2170
F5/8 type C domain protein; Identified by match to protein family HMM PF00754; match to protein family HMM PF00801; match to protein family HMM PF03644.
 
   
 0.842
CUW_2166
Glycosyl hydrolase family 20, domain 2; Identified by match to protein family HMM PF00728; match to protein family HMM PF02838.
 
   
 0.821
CUW_2161
ABC transporter, permease protein; Identified by match to protein family HMM PF00528.
 
   
 0.767
CUW_2162
ABC transporter, permease protein; Identified by match to protein family HMM PF00528.
 
   
 0.748
CUW_1286
Glycosyl hydrolase family 38 N-terminal domain protein; Identified by match to protein family HMM PF01074.
 
  
 0.718
CUW_1337
Glycosyl hydrolase family 38 C-terminal domain protein; Identified by match to protein family HMM PF01074; match to protein family HMM PF07748; match to protein family HMM PF09261.
 
  
 0.716
CUW_1666
Conserved hypothetical protein.
 
   
 0.671
CUW_2160
Response regulator receiver domain protein; Identified by match to protein family HMM PF00072; match to protein family HMM PF00165.
 
     0.635
Your Current Organism:
Turicibacter sanguinis
NCBI taxonomy Id: 702450
Other names: T. sanguinis PC909, Turicibacter sanguinis PC909, Turicibacter sanguinis str. PC909, Turicibacter sanguinis strain PC909, Turicibacter sp. PC909
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