CUW_2575 protein (Turicibacter sanguinis) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:

Neighborhood

Gene Fusion

Cooccurrence

Coexpression

Experiments

Databases

Textmining

[Homology]

Score

CUW_2575

Identified by match to protein family HMM PF00903. (125 aa)

Predicted Functional Partners:

CUW_1126

0.913

CUW_1010

0.900

CUW_1976

0.900

ilvA

0.833

CUW_0214

0.804

CUW_2283

0.720

nifJ

0.678

rnz

0.618

CUW_0597

0.587

CUW_1256

0.551

Your Current Organism:

Turicibacter sanguinis

NCBI taxonomy Id: 702450
Other names: T. sanguinis PC909, Turicibacter sanguinis PC909, Turicibacter sanguinis str. PC909, Turicibacter sanguinis strain PC909, Turicibacter sp. PC909

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
CUW_0214	CUW_1010	CUW_0214	CUW_1010	Putative L-serine ammonia-lyase; Identified by match to protein family HMM PF03313; match to protein family HMM PF03315; Belongs to the iron-sulfur dependent L-serine dehydratase family.	Identified by match to protein family HMM PF00903.	0.804
CUW_0214	CUW_1976	CUW_0214	CUW_1976	Putative L-serine ammonia-lyase; Identified by match to protein family HMM PF03313; match to protein family HMM PF03315; Belongs to the iron-sulfur dependent L-serine dehydratase family.	Putative lipoprotein.	0.800
CUW_0214	CUW_2575	CUW_0214	CUW_2575	Putative L-serine ammonia-lyase; Identified by match to protein family HMM PF03313; match to protein family HMM PF03315; Belongs to the iron-sulfur dependent L-serine dehydratase family.	Identified by match to protein family HMM PF00903.	0.804
CUW_0214	ilvA	CUW_0214	CUW_0256	Putative L-serine ammonia-lyase; Identified by match to protein family HMM PF03313; match to protein family HMM PF03315; Belongs to the iron-sulfur dependent L-serine dehydratase family.	Threonine ammonia-lyase; Identified by match to protein family HMM PF00291; match to protein family HMM PF01842; match to protein family HMM TIGR01127.	0.929
CUW_0214	nifJ	CUW_0214	CUW_1535	Putative L-serine ammonia-lyase; Identified by match to protein family HMM PF03313; match to protein family HMM PF03315; Belongs to the iron-sulfur dependent L-serine dehydratase family.	Pyruvate:ferredoxin (flavodoxin) oxidoreductase; Identified by match to protein family HMM PF00037; match to protein family HMM PF01558; match to protein family HMM PF01855; match to protein family HMM TIGR02176.	0.412
CUW_0597	CUW_1010	CUW_0597	CUW_1010	Conserved hypothetical protein; Identified by match to protein family HMM PF04060.	Identified by match to protein family HMM PF00903.	0.587
CUW_0597	CUW_2575	CUW_0597	CUW_2575	Conserved hypothetical protein; Identified by match to protein family HMM PF04060.	Identified by match to protein family HMM PF00903.	0.587
CUW_0597	nifJ	CUW_0597	CUW_1535	Conserved hypothetical protein; Identified by match to protein family HMM PF04060.	Pyruvate:ferredoxin (flavodoxin) oxidoreductase; Identified by match to protein family HMM PF00037; match to protein family HMM PF01558; match to protein family HMM PF01855; match to protein family HMM TIGR02176.	0.992
CUW_1010	CUW_0214	CUW_1010	CUW_0214	Identified by match to protein family HMM PF00903.	Putative L-serine ammonia-lyase; Identified by match to protein family HMM PF03313; match to protein family HMM PF03315; Belongs to the iron-sulfur dependent L-serine dehydratase family.	0.804
CUW_1010	CUW_0597	CUW_1010	CUW_0597	Identified by match to protein family HMM PF00903.	Conserved hypothetical protein; Identified by match to protein family HMM PF04060.	0.587
CUW_1010	CUW_1126	CUW_1010	CUW_1126	Identified by match to protein family HMM PF00903.	Metallo-beta-lactamase domain protein; Identified by match to protein family HMM PF00753.	0.913
CUW_1010	CUW_1256	CUW_1010	CUW_1256	Identified by match to protein family HMM PF00903.	Ferredoxin; Ferredoxins are iron-sulfur proteins that transfer electrons in a wide variety of metabolic reactions.	0.551
CUW_1010	CUW_1976	CUW_1010	CUW_1976	Identified by match to protein family HMM PF00903.	Putative lipoprotein.	0.900
CUW_1010	CUW_2575	CUW_1010	CUW_2575	Identified by match to protein family HMM PF00903.	Identified by match to protein family HMM PF00903.	0.900
CUW_1010	ilvA	CUW_1010	CUW_0256	Identified by match to protein family HMM PF00903.	Threonine ammonia-lyase; Identified by match to protein family HMM PF00291; match to protein family HMM PF01842; match to protein family HMM TIGR01127.	0.833
CUW_1010	nifJ	CUW_1010	CUW_1535	Identified by match to protein family HMM PF00903.	Pyruvate:ferredoxin (flavodoxin) oxidoreductase; Identified by match to protein family HMM PF00037; match to protein family HMM PF01558; match to protein family HMM PF01855; match to protein family HMM TIGR02176.	0.678
CUW_1126	CUW_1010	CUW_1126	CUW_1010	Metallo-beta-lactamase domain protein; Identified by match to protein family HMM PF00753.	Identified by match to protein family HMM PF00903.	0.913
CUW_1126	CUW_1976	CUW_1126	CUW_1976	Metallo-beta-lactamase domain protein; Identified by match to protein family HMM PF00753.	Putative lipoprotein.	0.900
CUW_1126	CUW_2575	CUW_1126	CUW_2575	Metallo-beta-lactamase domain protein; Identified by match to protein family HMM PF00753.	Identified by match to protein family HMM PF00903.	0.913
CUW_1256	CUW_1010	CUW_1256	CUW_1010	Ferredoxin; Ferredoxins are iron-sulfur proteins that transfer electrons in a wide variety of metabolic reactions.	Identified by match to protein family HMM PF00903.	0.551

page 1 of 3

Server load: low (28%) [HD]

Permalink

Network

Neighborhood

Experiments

Cooccurrence

Databases

Coexpression

Textmining

Fusion

© STRING Consortium 2025

Credits

Access

Info

About