Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
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[Homology]
Score
CUW_2802Glycosyltransferase, group 2 family protein; Identified by match to protein family HMM PF00535. (338 aa)    
Predicted Functional Partners:
CUW_2800
Glycosyltransferase, group 1 family protein; This gene contains a nucleotide ambiguity which may be the result of a sequencing error; identified by match to protein family HMM PF00534.
 
 
 0.853
CUW_2801
Glycosyltransferase, group 2 family protein; Identified by match to protein family HMM PF00535.
 
    
0.805
mviN
Integral membrane protein MviN; Involved in peptidoglycan biosynthesis. Transports lipid- linked peptidoglycan precursors from the inner to the outer leaflet of the cytoplasmic membrane.
     
 0.746
CUW_1590
Glycosyltransferase, group 1 family protein; Identified by match to protein family HMM PF00534.
 
 0.724
CUW_1568
Hypothetical protein; Identified by glimmer; putative.
  
 
 0.532
CUW_1594
Putative membrane protein.
 
  
 0.429
Your Current Organism:
Turicibacter sanguinis
NCBI taxonomy Id: 702450
Other names: T. sanguinis PC909, Turicibacter sanguinis PC909, Turicibacter sanguinis str. PC909, Turicibacter sanguinis strain PC909, Turicibacter sp. PC909
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