Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| CUW_1801 | mviN | CUW_1801 | CUW_2803 | Identified by match to protein family HMM PF03415. | Integral membrane protein MviN; Involved in peptidoglycan biosynthesis. Transports lipid- linked peptidoglycan precursors from the inner to the outer leaflet of the cytoplasmic membrane. | 0.686 |
| CUW_2800 | CUW_2801 | CUW_2800 | CUW_2801 | Glycosyltransferase, group 1 family protein; This gene contains a nucleotide ambiguity which may be the result of a sequencing error; identified by match to protein family HMM PF00534. | Glycosyltransferase, group 2 family protein; Identified by match to protein family HMM PF00535. | 0.885 |
| CUW_2800 | CUW_2802 | CUW_2800 | CUW_2802 | Glycosyltransferase, group 1 family protein; This gene contains a nucleotide ambiguity which may be the result of a sequencing error; identified by match to protein family HMM PF00534. | Glycosyltransferase, group 2 family protein; Identified by match to protein family HMM PF00535. | 0.850 |
| CUW_2800 | mviN | CUW_2800 | CUW_2803 | Glycosyltransferase, group 1 family protein; This gene contains a nucleotide ambiguity which may be the result of a sequencing error; identified by match to protein family HMM PF00534. | Integral membrane protein MviN; Involved in peptidoglycan biosynthesis. Transports lipid- linked peptidoglycan precursors from the inner to the outer leaflet of the cytoplasmic membrane. | 0.747 |
| CUW_2801 | CUW_2800 | CUW_2801 | CUW_2800 | Glycosyltransferase, group 2 family protein; Identified by match to protein family HMM PF00535. | Glycosyltransferase, group 1 family protein; This gene contains a nucleotide ambiguity which may be the result of a sequencing error; identified by match to protein family HMM PF00534. | 0.885 |
| CUW_2801 | CUW_2802 | CUW_2801 | CUW_2802 | Glycosyltransferase, group 2 family protein; Identified by match to protein family HMM PF00535. | Glycosyltransferase, group 2 family protein; Identified by match to protein family HMM PF00535. | 0.810 |
| CUW_2801 | mviN | CUW_2801 | CUW_2803 | Glycosyltransferase, group 2 family protein; Identified by match to protein family HMM PF00535. | Integral membrane protein MviN; Involved in peptidoglycan biosynthesis. Transports lipid- linked peptidoglycan precursors from the inner to the outer leaflet of the cytoplasmic membrane. | 0.760 |
| CUW_2802 | CUW_2800 | CUW_2802 | CUW_2800 | Glycosyltransferase, group 2 family protein; Identified by match to protein family HMM PF00535. | Glycosyltransferase, group 1 family protein; This gene contains a nucleotide ambiguity which may be the result of a sequencing error; identified by match to protein family HMM PF00534. | 0.850 |
| CUW_2802 | CUW_2801 | CUW_2802 | CUW_2801 | Glycosyltransferase, group 2 family protein; Identified by match to protein family HMM PF00535. | Glycosyltransferase, group 2 family protein; Identified by match to protein family HMM PF00535. | 0.810 |
| CUW_2802 | mviN | CUW_2802 | CUW_2803 | Glycosyltransferase, group 2 family protein; Identified by match to protein family HMM PF00535. | Integral membrane protein MviN; Involved in peptidoglycan biosynthesis. Transports lipid- linked peptidoglycan precursors from the inner to the outer leaflet of the cytoplasmic membrane. | 0.753 |
| murA | mviN | CUW_2408 | CUW_2803 | UDP-N-acetylglucosamine 1-carboxyvinyltransferase; Cell wall formation. Adds enolpyruvyl to UDP-N- acetylglucosamine; Belongs to the EPSP synthase family. MurA subfamily. | Integral membrane protein MviN; Involved in peptidoglycan biosynthesis. Transports lipid- linked peptidoglycan precursors from the inner to the outer leaflet of the cytoplasmic membrane. | 0.440 |
| mviN | CUW_1801 | CUW_2803 | CUW_1801 | Integral membrane protein MviN; Involved in peptidoglycan biosynthesis. Transports lipid- linked peptidoglycan precursors from the inner to the outer leaflet of the cytoplasmic membrane. | Identified by match to protein family HMM PF03415. | 0.686 |
| mviN | CUW_2800 | CUW_2803 | CUW_2800 | Integral membrane protein MviN; Involved in peptidoglycan biosynthesis. Transports lipid- linked peptidoglycan precursors from the inner to the outer leaflet of the cytoplasmic membrane. | Glycosyltransferase, group 1 family protein; This gene contains a nucleotide ambiguity which may be the result of a sequencing error; identified by match to protein family HMM PF00534. | 0.747 |
| mviN | CUW_2801 | CUW_2803 | CUW_2801 | Integral membrane protein MviN; Involved in peptidoglycan biosynthesis. Transports lipid- linked peptidoglycan precursors from the inner to the outer leaflet of the cytoplasmic membrane. | Glycosyltransferase, group 2 family protein; Identified by match to protein family HMM PF00535. | 0.760 |
| mviN | CUW_2802 | CUW_2803 | CUW_2802 | Integral membrane protein MviN; Involved in peptidoglycan biosynthesis. Transports lipid- linked peptidoglycan precursors from the inner to the outer leaflet of the cytoplasmic membrane. | Glycosyltransferase, group 2 family protein; Identified by match to protein family HMM PF00535. | 0.753 |
| mviN | murA | CUW_2803 | CUW_2408 | Integral membrane protein MviN; Involved in peptidoglycan biosynthesis. Transports lipid- linked peptidoglycan precursors from the inner to the outer leaflet of the cytoplasmic membrane. | UDP-N-acetylglucosamine 1-carboxyvinyltransferase; Cell wall formation. Adds enolpyruvyl to UDP-N- acetylglucosamine; Belongs to the EPSP synthase family. MurA subfamily. | 0.440 |