STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EFR87774.1Multidrug efflux protein YfmO; Identified by match to protein family HMM PF07690. (397 aa)    
Predicted Functional Partners:
EFR87773.1
PadR family transcriptional regulator; Identified by match to protein family HMM PF03551.
 
   
 0.759
EFR88679.1
Lincomycin resistance protein LmrB; Identified by match to protein family HMM PF07690; match to protein family HMM TIGR00711; Belongs to the major facilitator superfamily.
  
     0.502
EFR87537.1
Lincomycin resistance protein LmrB; Identified by match to protein family HMM PF07690; match to protein family HMM TIGR00711; Belongs to the major facilitator superfamily.
  
   
 0.499
EFR87776.1
Transcription regulator, Cro/CI family -related protein.
  
    0.491
EFR87775.1
Conserved hypothetical protein.
       0.488
EFR86636.1
Lincomycin resistance protein LmrB; Identified by match to protein family HMM PF07690; match to protein family HMM TIGR00711; Belongs to the major facilitator superfamily.
  
     0.478
EFR86472.1
Para-aminobenzoate synthase, component I; Identified by match to protein family HMM PF00425.
   
 
 0.453
EFR86466.1
Para-aminobenzoate synthase, component I; Identified by match to protein family HMM PF00425.
   
 
 0.453
EFR86765.1
Glyceraldehyde-3-phosphate dehydrogenase, type I; Identified by match to protein family HMM PF00044; match to protein family HMM PF02800; match to protein family HMM TIGR01534; Belongs to the glyceraldehyde-3-phosphate dehydrogenase family.
    
 0.440
EFR87777.1
Topology modulation protein.
       0.416
Your Current Organism:
Listeria marthii
NCBI taxonomy Id: 702457
Other names: L. marthii FSL S4-120, Listeria marthii FSL S4-120
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