STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EFR86458.1ABC transporter, ATP-binding/permease protein. (185 aa)    
Predicted Functional Partners:
EFR86457.1
ABC transporter, ATP-binding/permease protein.
 
     0.974
EFR86467.1
ABC transporter, ATP-binding/permease protein; Identified by match to protein family HMM PF00005; match to protein family HMM PF00664.
 
  0.953
EFR86492.1
ABC transporter, CydDC cysteine exporter (CydDC-E) family, permease/ATP-binding protein CydC; Identified by match to protein family HMM PF00005; match to protein family HMM TIGR02868.
 
 
  0.920
EFR88610.1
ABC transporter, ATP-binding/permease protein; Identified by match to protein family HMM PF00005; match to protein family HMM PF00664.
 
 
  0.837
EFR86491.1
ATP-binding/permease protein CydC; Identified by match to protein family HMM PF00005.
 
  0.808
EFR87702.1
Chaperone protein DnaK; Identified by match to protein family HMM PF00012; match to protein family HMM TIGR02350.
   
 0.717
EFR88385.1
Cation transporter E1-E2 family ATPase; Identified by match to protein family HMM PF00689.
  
 0.662
EFR88398.1
Cation-transporting ATPase PacL; Identified by match to protein family HMM PF00122; match to protein family HMM PF00690; match to protein family HMM PF00702; match to protein family HMM TIGR01494.
   
 0.612
EFR88374.1
Cation-transporting ATPase Pma1; Identified by match to protein family HMM PF00122; match to protein family HMM PF00689; match to protein family HMM PF00690; match to protein family HMM PF00702; match to protein family HMM TIGR01494.
   
 0.612
EFR86532.1
Magnesium-translocating P-type ATPase; Identified by match to protein family HMM PF00122; match to protein family HMM PF00690; match to protein family HMM PF00702; match to protein family HMM TIGR01494; match to protein family HMM TIGR01524.
   
 0.609
Your Current Organism:
Listeria marthii
NCBI taxonomy Id: 702457
Other names: L. marthii FSL S4-120, Listeria marthii FSL S4-120
Server load: medium (42%) [HD]