STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ACYPI004613ACYPI004613 protein. (177 aa)    
Predicted Functional Partners:
J9K7G9_ACYPI
Uncharacterized protein.
    
 0.977
J9JTK3_ACYPI
DUF3677 domain-containing protein.
    
 0.956
J9K396_ACYPI
Uncharacterized protein.
    
 0.954
J9JY41_ACYPI
VWFA domain-containing protein.
    
 0.833
J9JZY8_ACYPI
Beta-Casp domain-containing protein.
    
 0.751
J9JWT4_ACYPI
Uncharacterized protein.
     
 0.735
J9K2S5_ACYPI
Uncharacterized protein.
   
 0.733
J9JLK9_ACYPI
Uncharacterized protein.
     
 0.702
J9LTL7_ACYPI
PHD-type domain-containing protein.
   
 
  0.683
ACYPI009782
DNA-directed RNA polymerases I, II, and III subunit RPABC3; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Common component of RNA polymerases I, II and III which synthesize ribosomal RNA precursors, mRNA precursors and many functional non- coding RNAs, and small RNAs, such as 5S rRNA and tRNAs, respectively.
   
 
  0.678
Your Current Organism:
Acyrthosiphon pisum
NCBI taxonomy Id: 7029
Other names: A. pisum, Acyrthosiphum pisum, pea aphid
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