STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
cry2-1Chryptochrome 2-1. (512 aa)    
Predicted Functional Partners:
Cyc
Cycle A variant.
   
 0.854
J9L7B5_ACYPI
TIMELESS domain-containing protein.
    
 0.804
per
Period B variant.
   
 0.785
Clk
Clock A variant.
    
 0.759
J9K5N1_ACYPI
Protein kinase domain-containing protein; Belongs to the protein kinase superfamily.
    
 0.703
J9JM17_ACYPI
Uncharacterized protein.
    
 0.679
J9KYE5_ACYPI
Arylalkylamine N-acetyltransferase 4 isoform B.
    
 0.548
Pdp1
BZIP domain-containing protein.
   
  
 0.513
ACYPI004550
ACYPI004550 protein.
  
  
 0.494
J9M410_ACYPI
Uncharacterized protein.
  
  
 0.494
Your Current Organism:
Acyrthosiphon pisum
NCBI taxonomy Id: 7029
Other names: A. pisum, Acyrthosiphum pisum, pea aphid
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