STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
J9JQE3_ACYPIUncharacterized protein. (343 aa)    
Predicted Functional Partners:
J9JP83_ACYPI
Uncharacterized protein.
   
 0.933
J9KN63_ACYPI
TFIID_20kDa domain-containing protein.
    
 0.931
J9JQ22_ACYPI
TAF domain-containing protein.
   
 0.929
X1XTS4_ACYPI
Uncharacterized protein.
    
 0.929
J9JR13_ACYPI
Uncharacterized protein.
    
 0.926
J9K8X1_ACYPI
Uncharacterized protein.
   
 0.926
J9K4H3_ACYPI
SANT domain-containing protein.
    
 0.925
ACYPI003151
ACYPI003151 protein.
   
 0.924
J9JZX6_ACYPI
TAFII28 domain-containing protein.
   
 0.923
J9K5T4_ACYPI
General transcription factor IIF subunit 2; TFIIF is a general transcription initiation factor that binds to RNA polymerase II and helps to recruit it to the initiation complex in collaboration with TFIIB. It promotes transcription elongation. This subunit shows ATP-dependent DNA-helicase activity.
    
 0.923
Your Current Organism:
Acyrthosiphon pisum
NCBI taxonomy Id: 7029
Other names: A. pisum, Acyrthosiphum pisum, pea aphid
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