J9JUC8_ACYPI protein (Acyrthosiphon pisum) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:

Neighborhood

Gene Fusion

Cooccurrence

Coexpression

Experiments

Databases

Textmining

[Homology]

Score

J9JUC8_ACYPI

Uncharacterized protein. (266 aa)

Predicted Functional Partners:

ACYPI000455

0.993

ACYPI002597

0.983

ACYPI004127

0.980

ACYPI004065

0.980

J9K7M9_ACYPI

0.978

ACYPI007336

0.975

J9K0V7_ACYPI

0.972

J9K495_ACYPI

0.964

ACYPI010200

0.963

ACYPI008730

0.962

Your Current Organism:

Acyrthosiphon pisum

NCBI taxonomy Id: 7029
Other names: A. pisum, Acyrthosiphum pisum, pea aphid

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ACYPI000455	ACYPI002597	C4WRU2	C4WSI9	ACYPI000455 protein; Belongs to the universal ribosomal protein uL14 family.	ACYPI002597 protein.	0.999
ACYPI000455	ACYPI004065	C4WRU2	C4WVM0	ACYPI000455 protein; Belongs to the universal ribosomal protein uL14 family.	ACYPI004065 protein.	0.999
ACYPI000455	ACYPI004127	C4WRU2	C4WS93	ACYPI000455 protein; Belongs to the universal ribosomal protein uL14 family.	ACYPI004127 protein.	0.999
ACYPI000455	ACYPI007336	C4WRU2	C4WV71	ACYPI000455 protein; Belongs to the universal ribosomal protein uL14 family.	ACYPI007336 protein; Belongs to the bacterial ribosomal protein bL20 family.	0.999
ACYPI000455	ACYPI008730	C4WRU2	C4WSS1	ACYPI000455 protein; Belongs to the universal ribosomal protein uL14 family.	ACYPI008730 protein.	0.997
ACYPI000455	ACYPI010200	C4WRU2	C4WTW7	ACYPI000455 protein; Belongs to the universal ribosomal protein uL14 family.	ACYPI010200 protein.	0.999
ACYPI000455	J9JUC8_ACYPI	C4WRU2	J9JUC8	ACYPI000455 protein; Belongs to the universal ribosomal protein uL14 family.	Uncharacterized protein.	0.993
ACYPI000455	J9K0V7_ACYPI	C4WRU2	J9K0V7	ACYPI000455 protein; Belongs to the universal ribosomal protein uL14 family.	Mitochondrial GTPase 1; Plays a role in the regulation of the mitochondrial ribosome assembly and of translational activity. Displays mitochondrial GTPase activity; Belongs to the TRAFAC class YlqF/YawG GTPase family. MTG1 subfamily.	0.921
ACYPI000455	J9K495_ACYPI	C4WRU2	J9K495	ACYPI000455 protein; Belongs to the universal ribosomal protein uL14 family.	Ribosomal_L23eN domain-containing protein; Belongs to the universal ribosomal protein uL23 family.	0.999
ACYPI000455	J9K7M9_ACYPI	C4WRU2	J9K7M9	ACYPI000455 protein; Belongs to the universal ribosomal protein uL14 family.	Uncharacterized protein.	0.999
ACYPI002597	ACYPI000455	C4WSI9	C4WRU2	ACYPI002597 protein.	ACYPI000455 protein; Belongs to the universal ribosomal protein uL14 family.	0.999
ACYPI002597	ACYPI004065	C4WSI9	C4WVM0	ACYPI002597 protein.	ACYPI004065 protein.	0.999
ACYPI002597	ACYPI004127	C4WSI9	C4WS93	ACYPI002597 protein.	ACYPI004127 protein.	0.999
ACYPI002597	ACYPI007336	C4WSI9	C4WV71	ACYPI002597 protein.	ACYPI007336 protein; Belongs to the bacterial ribosomal protein bL20 family.	0.999
ACYPI002597	ACYPI008730	C4WSI9	C4WSS1	ACYPI002597 protein.	ACYPI008730 protein.	0.998
ACYPI002597	ACYPI010200	C4WSI9	C4WTW7	ACYPI002597 protein.	ACYPI010200 protein.	0.999
ACYPI002597	J9JUC8_ACYPI	C4WSI9	J9JUC8	ACYPI002597 protein.	Uncharacterized protein.	0.983
ACYPI002597	J9K0V7_ACYPI	C4WSI9	J9K0V7	ACYPI002597 protein.	Mitochondrial GTPase 1; Plays a role in the regulation of the mitochondrial ribosome assembly and of translational activity. Displays mitochondrial GTPase activity; Belongs to the TRAFAC class YlqF/YawG GTPase family. MTG1 subfamily.	0.928
ACYPI002597	J9K495_ACYPI	C4WSI9	J9K495	ACYPI002597 protein.	Ribosomal_L23eN domain-containing protein; Belongs to the universal ribosomal protein uL23 family.	0.999
ACYPI002597	J9K7M9_ACYPI	C4WSI9	J9K7M9	ACYPI002597 protein.	Uncharacterized protein.	0.999