J9JY86_ACYPI protein (Acyrthosiphon pisum) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:

Neighborhood

Gene Fusion

Cooccurrence

Coexpression

Experiments

Databases

Textmining

[Homology]

Score

J9JY86_ACYPI

Codanin-1_C domain-containing protein. (1028 aa)

Predicted Functional Partners:

J9KA92_ACYPI

0.778

J9JPN0_ACYPI

0.763

J9JJL4_ACYPI

0.644

J9K556_ACYPI

0.507

J9KA39_ACYPI

0.491

J9K082_ACYPI

0.486

J9KW73_ACYPI

0.486

J9K288_ACYPI

0.476

J9K0A4_ACYPI

0.443

Your Current Organism:

Acyrthosiphon pisum

NCBI taxonomy Id: 7029
Other names: A. pisum, Acyrthosiphum pisum, pea aphid

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
J9JJL4_ACYPI	J9JPN0_ACYPI	J9JJL4	J9JPN0	Uncharacterized protein; Belongs to the MAGUK family.	Uncharacterized protein.	0.933
J9JJL4_ACYPI	J9JY86_ACYPI	J9JJL4	J9JY86	Uncharacterized protein; Belongs to the MAGUK family.	Codanin-1_C domain-containing protein.	0.644
J9JPN0_ACYPI	J9JJL4_ACYPI	J9JPN0	J9JJL4	Uncharacterized protein.	Uncharacterized protein; Belongs to the MAGUK family.	0.933
J9JPN0_ACYPI	J9JY86_ACYPI	J9JPN0	J9JY86	Uncharacterized protein.	Codanin-1_C domain-containing protein.	0.763
J9JY86_ACYPI	J9JJL4_ACYPI	J9JY86	J9JJL4	Codanin-1_C domain-containing protein.	Uncharacterized protein; Belongs to the MAGUK family.	0.644
J9JY86_ACYPI	J9JPN0_ACYPI	J9JY86	J9JPN0	Codanin-1_C domain-containing protein.	Uncharacterized protein.	0.763
J9JY86_ACYPI	J9K082_ACYPI	J9JY86	J9K082	Codanin-1_C domain-containing protein.	Uncharacterized protein.	0.486
J9JY86_ACYPI	J9K0A4_ACYPI	J9JY86	J9K0A4	Codanin-1_C domain-containing protein.	Kinesin-like protein; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family.	0.443
J9JY86_ACYPI	J9K288_ACYPI	J9JY86	J9K288	Codanin-1_C domain-containing protein.	Uncharacterized protein.	0.476
J9JY86_ACYPI	J9K556_ACYPI	J9JY86	J9K556	Codanin-1_C domain-containing protein.	Protein transport protein SEC23; Component of the coat protein complex II (COPII) which promotes the formation of transport vesicles from the endoplasmic reticulum (ER). The coat has two main functions, the physical deformation of the endoplasmic reticulum membrane into vesicles and the selection of cargo molecules; Belongs to the SEC23/SEC24 family. SEC23 subfamily.	0.507
J9JY86_ACYPI	J9KA39_ACYPI	J9JY86	J9KA39	Codanin-1_C domain-containing protein.	Uncharacterized protein.	0.491
J9JY86_ACYPI	J9KA92_ACYPI	J9JY86	J9KA92	Codanin-1_C domain-containing protein.	Uncharacterized protein.	0.778
J9JY86_ACYPI	J9KW73_ACYPI	J9JY86	J9KW73	Codanin-1_C domain-containing protein.	Uncharacterized protein.	0.486
J9K082_ACYPI	J9JY86_ACYPI	J9K082	J9JY86	Uncharacterized protein.	Codanin-1_C domain-containing protein.	0.486
J9K0A4_ACYPI	J9JY86_ACYPI	J9K0A4	J9JY86	Kinesin-like protein; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family.	Codanin-1_C domain-containing protein.	0.443
J9K0A4_ACYPI	J9KA39_ACYPI	J9K0A4	J9KA39	Kinesin-like protein; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family.	Uncharacterized protein.	0.531
J9K0A4_ACYPI	J9KA92_ACYPI	J9K0A4	J9KA92	Kinesin-like protein; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family.	Uncharacterized protein.	0.460
J9K288_ACYPI	J9JY86_ACYPI	J9K288	J9JY86	Uncharacterized protein.	Codanin-1_C domain-containing protein.	0.476
J9K288_ACYPI	J9KA92_ACYPI	J9K288	J9KA92	Uncharacterized protein.	Uncharacterized protein.	0.846
J9K556_ACYPI	J9JY86_ACYPI	J9K556	J9JY86	Protein transport protein SEC23; Component of the coat protein complex II (COPII) which promotes the formation of transport vesicles from the endoplasmic reticulum (ER). The coat has two main functions, the physical deformation of the endoplasmic reticulum membrane into vesicles and the selection of cargo molecules; Belongs to the SEC23/SEC24 family. SEC23 subfamily.	Codanin-1_C domain-containing protein.	0.507