Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
ACYPI010127 | J9JQC9_ACYPI | C4WYC2 | J9JQC9 | 40S ribosomal protein S3a; Belongs to the eukaryotic ribosomal protein eS1 family. | Uncharacterized protein; Belongs to the DEAD box helicase family. | 0.883 |
ACYPI010127 | J9JVD4_ACYPI | C4WYC2 | J9JVD4 | 40S ribosomal protein S3a; Belongs to the eukaryotic ribosomal protein eS1 family. | Uncharacterized protein. | 0.780 |
ACYPI010127 | J9JWE1_ACYPI | C4WYC2 | J9JWE1 | 40S ribosomal protein S3a; Belongs to the eukaryotic ribosomal protein eS1 family. | Uncharacterized protein. | 0.780 |
ACYPI010127 | J9JZ37_ACYPI | C4WYC2 | J9JZ37 | 40S ribosomal protein S3a; Belongs to the eukaryotic ribosomal protein eS1 family. | Polyadenylate-binding protein; Binds the poly(A) tail of mRNA. Belongs to the polyadenylate-binding protein type-1 family. | 0.678 |
ACYPI010127 | J9K4D0_ACYPI | C4WYC2 | J9K4D0 | 40S ribosomal protein S3a; Belongs to the eukaryotic ribosomal protein eS1 family. | Tr-type G domain-containing protein. | 0.794 |
ACYPI010127 | J9KAC6_ACYPI | C4WYC2 | J9KAC6 | 40S ribosomal protein S3a; Belongs to the eukaryotic ribosomal protein eS1 family. | Polyadenylate-binding protein; Binds the poly(A) tail of mRNA. Belongs to the polyadenylate-binding protein type-1 family. | 0.678 |
ACYPI010127 | X1WI92_ACYPI | C4WYC2 | X1WI92 | 40S ribosomal protein S3a; Belongs to the eukaryotic ribosomal protein eS1 family. | Polyadenylate-binding protein; Binds the poly(A) tail of mRNA. Belongs to the polyadenylate-binding protein type-1 family. | 0.678 |
J9JQC9_ACYPI | ACYPI010127 | J9JQC9 | C4WYC2 | Uncharacterized protein; Belongs to the DEAD box helicase family. | 40S ribosomal protein S3a; Belongs to the eukaryotic ribosomal protein eS1 family. | 0.883 |
J9JQC9_ACYPI | J9JZ37_ACYPI | J9JQC9 | J9JZ37 | Uncharacterized protein; Belongs to the DEAD box helicase family. | Polyadenylate-binding protein; Binds the poly(A) tail of mRNA. Belongs to the polyadenylate-binding protein type-1 family. | 0.661 |
J9JQC9_ACYPI | J9KAC6_ACYPI | J9JQC9 | J9KAC6 | Uncharacterized protein; Belongs to the DEAD box helicase family. | Polyadenylate-binding protein; Binds the poly(A) tail of mRNA. Belongs to the polyadenylate-binding protein type-1 family. | 0.661 |
J9JQC9_ACYPI | PAN2 | J9JQC9 | J9JVT2 | Uncharacterized protein; Belongs to the DEAD box helicase family. | PAN2-PAN3 deadenylation complex catalytic subunit PAN2; Catalytic subunit of the poly(A)-nuclease (PAN) deadenylation complex, one of two cytoplasmic mRNA deadenylases involved in general and miRNA-mediated mRNA turnover. PAN specifically shortens poly(A) tails of RNA and the activity is stimulated by poly(A)-binding protein (PABP). PAN deadenylation is followed by rapid degradation of the shortened mRNA tails by the CCR4-NOT complex. Deadenylated mRNAs are then degraded by two alternative mechanisms, namely exosome-mediated 3'-5' exonucleolytic degradation, or deadenlyation-dependent [...] | 0.436 |
J9JQC9_ACYPI | X1WI92_ACYPI | J9JQC9 | X1WI92 | Uncharacterized protein; Belongs to the DEAD box helicase family. | Polyadenylate-binding protein; Binds the poly(A) tail of mRNA. Belongs to the polyadenylate-binding protein type-1 family. | 0.661 |
J9JVD4_ACYPI | ACYPI010127 | J9JVD4 | C4WYC2 | Uncharacterized protein. | 40S ribosomal protein S3a; Belongs to the eukaryotic ribosomal protein eS1 family. | 0.780 |
J9JVD4_ACYPI | J9JZ37_ACYPI | J9JVD4 | J9JZ37 | Uncharacterized protein. | Polyadenylate-binding protein; Binds the poly(A) tail of mRNA. Belongs to the polyadenylate-binding protein type-1 family. | 0.661 |
J9JVD4_ACYPI | J9KAC6_ACYPI | J9JVD4 | J9KAC6 | Uncharacterized protein. | Polyadenylate-binding protein; Binds the poly(A) tail of mRNA. Belongs to the polyadenylate-binding protein type-1 family. | 0.661 |
J9JVD4_ACYPI | PAN2 | J9JVD4 | J9JVT2 | Uncharacterized protein. | PAN2-PAN3 deadenylation complex catalytic subunit PAN2; Catalytic subunit of the poly(A)-nuclease (PAN) deadenylation complex, one of two cytoplasmic mRNA deadenylases involved in general and miRNA-mediated mRNA turnover. PAN specifically shortens poly(A) tails of RNA and the activity is stimulated by poly(A)-binding protein (PABP). PAN deadenylation is followed by rapid degradation of the shortened mRNA tails by the CCR4-NOT complex. Deadenylated mRNAs are then degraded by two alternative mechanisms, namely exosome-mediated 3'-5' exonucleolytic degradation, or deadenlyation-dependent [...] | 0.436 |
J9JVD4_ACYPI | X1WI92_ACYPI | J9JVD4 | X1WI92 | Uncharacterized protein. | Polyadenylate-binding protein; Binds the poly(A) tail of mRNA. Belongs to the polyadenylate-binding protein type-1 family. | 0.661 |
J9JWE1_ACYPI | ACYPI010127 | J9JWE1 | C4WYC2 | Uncharacterized protein. | 40S ribosomal protein S3a; Belongs to the eukaryotic ribosomal protein eS1 family. | 0.780 |
J9JWE1_ACYPI | J9JZ37_ACYPI | J9JWE1 | J9JZ37 | Uncharacterized protein. | Polyadenylate-binding protein; Binds the poly(A) tail of mRNA. Belongs to the polyadenylate-binding protein type-1 family. | 0.661 |
J9JWE1_ACYPI | J9KAC6_ACYPI | J9JWE1 | J9KAC6 | Uncharacterized protein. | Polyadenylate-binding protein; Binds the poly(A) tail of mRNA. Belongs to the polyadenylate-binding protein type-1 family. | 0.661 |
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