J9JZH4_ACYPI protein (Acyrthosiphon pisum) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:

Neighborhood

Gene Fusion

Cooccurrence

Coexpression

Experiments

Databases

Textmining

[Homology]

Score

J9JZH4_ACYPI

Uncharacterized protein. (404 aa)

Predicted Functional Partners:

J9JN07_ACYPI

0.899

J9JQN2_ACYPI

0.899

J9KL57_ACYPI

0.669

X1WJ19_ACYPI

0.669

X1WQB9_ACYPI

0.669

X1X3R6_ACYPI

0.669

J9JX11_ACYPI

0.510

J9M5L5_ACYPI

0.510

X1X966_ACYPI

0.455

X1XT84_ACYPI

0.455

Your Current Organism:

Acyrthosiphon pisum

NCBI taxonomy Id: 7029
Other names: A. pisum, Acyrthosiphum pisum, pea aphid

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
J9JN07_ACYPI	J9JZH4_ACYPI	J9JN07	J9JZH4	Uncharacterized protein; Belongs to the TRAFAC class TrmE-Era-EngA-EngB-Septin-like GTPase superfamily. TrmE GTPase family.	Uncharacterized protein.	0.899
J9JN07_ACYPI	J9KL57_ACYPI	J9JN07	J9KL57	Uncharacterized protein; Belongs to the TRAFAC class TrmE-Era-EngA-EngB-Septin-like GTPase superfamily. TrmE GTPase family.	ERGIC_N domain-containing protein.	0.899
J9JN07_ACYPI	X1WJ19_ACYPI	J9JN07	X1WJ19	Uncharacterized protein; Belongs to the TRAFAC class TrmE-Era-EngA-EngB-Septin-like GTPase superfamily. TrmE GTPase family.	Uncharacterized protein.	0.899
J9JN07_ACYPI	X1WQB9_ACYPI	J9JN07	X1WQB9	Uncharacterized protein; Belongs to the TRAFAC class TrmE-Era-EngA-EngB-Septin-like GTPase superfamily. TrmE GTPase family.	ERGIC_N domain-containing protein.	0.899
J9JN07_ACYPI	X1X3R6_ACYPI	J9JN07	X1X3R6	Uncharacterized protein; Belongs to the TRAFAC class TrmE-Era-EngA-EngB-Septin-like GTPase superfamily. TrmE GTPase family.	COPIIcoated_ERV domain-containing protein.	0.899
J9JN07_ACYPI	X1X966_ACYPI	J9JN07	X1X966	Uncharacterized protein; Belongs to the TRAFAC class TrmE-Era-EngA-EngB-Septin-like GTPase superfamily. TrmE GTPase family.	DAO domain-containing protein.	0.822
J9JN07_ACYPI	X1XT84_ACYPI	J9JN07	X1XT84	Uncharacterized protein; Belongs to the TRAFAC class TrmE-Era-EngA-EngB-Septin-like GTPase superfamily. TrmE GTPase family.	DAO domain-containing protein.	0.822
J9JQN2_ACYPI	J9JZH4_ACYPI	J9JQN2	J9JZH4	Uncharacterized protein; Belongs to the STXBP/unc-18/SEC1 family.	Uncharacterized protein.	0.899
J9JX11_ACYPI	J9JZH4_ACYPI	J9JX11	J9JZH4	Tyrosine--tRNA ligase.	Uncharacterized protein.	0.510
J9JX11_ACYPI	J9KL57_ACYPI	J9JX11	J9KL57	Tyrosine--tRNA ligase.	ERGIC_N domain-containing protein.	0.510
J9JX11_ACYPI	J9M5L5_ACYPI	J9JX11	J9M5L5	Tyrosine--tRNA ligase.	Uncharacterized protein; Belongs to the class-I aminoacyl-tRNA synthetase family.	0.909
J9JX11_ACYPI	X1WJ19_ACYPI	J9JX11	X1WJ19	Tyrosine--tRNA ligase.	Uncharacterized protein.	0.510
J9JX11_ACYPI	X1WQB9_ACYPI	J9JX11	X1WQB9	Tyrosine--tRNA ligase.	ERGIC_N domain-containing protein.	0.510
J9JX11_ACYPI	X1X3R6_ACYPI	J9JX11	X1X3R6	Tyrosine--tRNA ligase.	COPIIcoated_ERV domain-containing protein.	0.510
J9JZH4_ACYPI	J9JN07_ACYPI	J9JZH4	J9JN07	Uncharacterized protein.	Uncharacterized protein; Belongs to the TRAFAC class TrmE-Era-EngA-EngB-Septin-like GTPase superfamily. TrmE GTPase family.	0.899
J9JZH4_ACYPI	J9JQN2_ACYPI	J9JZH4	J9JQN2	Uncharacterized protein.	Uncharacterized protein; Belongs to the STXBP/unc-18/SEC1 family.	0.899
J9JZH4_ACYPI	J9JX11_ACYPI	J9JZH4	J9JX11	Uncharacterized protein.	Tyrosine--tRNA ligase.	0.510
J9JZH4_ACYPI	J9KL57_ACYPI	J9JZH4	J9KL57	Uncharacterized protein.	ERGIC_N domain-containing protein.	0.669
J9JZH4_ACYPI	J9M5L5_ACYPI	J9JZH4	J9M5L5	Uncharacterized protein.	Uncharacterized protein; Belongs to the class-I aminoacyl-tRNA synthetase family.	0.510
J9JZH4_ACYPI	X1WJ19_ACYPI	J9JZH4	X1WJ19	Uncharacterized protein.	Uncharacterized protein.	0.669