J9K735_ACYPI protein (Acyrthosiphon pisum) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:

Neighborhood

Gene Fusion

Cooccurrence

Coexpression

Experiments

Databases

Textmining

[Homology]

Score

J9K735_ACYPI

J domain-containing protein. (2227 aa)

Predicted Functional Partners:

J9JXI4_ACYPI

0.772

X1XSM3_ACYPI

0.772

J9K779_ACYPI

0.755

J9JMW6_ACYPI

0.736

J9JMR2_ACYPI

0.654

J9JX31_ACYPI

0.632

J9K7F0_ACYPI

0.625

J9LU48_ACYPI

0.622

J9K3J8_ACYPI

0.613

J9K9P4_ACYPI

0.613

Your Current Organism:

Acyrthosiphon pisum

NCBI taxonomy Id: 7029
Other names: A. pisum, Acyrthosiphum pisum, pea aphid

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
J9JMR2_ACYPI	J9JX31_ACYPI	J9JMR2	J9JX31	SAC domain-containing protein.	LsmAD domain-containing protein.	0.637
J9JMR2_ACYPI	J9JXI4_ACYPI	J9JMR2	J9JXI4	SAC domain-containing protein.	Uncharacterized protein.	0.746
J9JMR2_ACYPI	J9K3J8_ACYPI	J9JMR2	J9K3J8	SAC domain-containing protein.	E3 ubiquitin-protein ligase parkin; Functions within a multiprotein E3 ubiquitin ligase complex, catalyzing the covalent attachment of ubiquitin moieties onto substrate proteins; Belongs to the RBR family. Parkin subfamily.	0.639
J9JMR2_ACYPI	J9K735_ACYPI	J9JMR2	J9K735	SAC domain-containing protein.	J domain-containing protein.	0.654
J9JMR2_ACYPI	J9K779_ACYPI	J9JMR2	J9K779	SAC domain-containing protein.	Vacuolar protein sorting-associated protein 35; Plays a role in vesicular protein sorting.	0.643
J9JMR2_ACYPI	J9K9P4_ACYPI	J9JMR2	J9K9P4	SAC domain-containing protein.	Protein kinase domain-containing protein.	0.617
J9JMR2_ACYPI	X1XSM3_ACYPI	J9JMR2	X1XSM3	SAC domain-containing protein.	J domain-containing protein.	0.746
J9JMW6_ACYPI	J9JXI4_ACYPI	J9JMW6	J9JXI4	PX domain-containing protein.	Uncharacterized protein.	0.988
J9JMW6_ACYPI	J9K735_ACYPI	J9JMW6	J9K735	PX domain-containing protein.	J domain-containing protein.	0.736
J9JMW6_ACYPI	J9K779_ACYPI	J9JMW6	J9K779	PX domain-containing protein.	Vacuolar protein sorting-associated protein 35; Plays a role in vesicular protein sorting.	0.990
J9JMW6_ACYPI	J9K7F0_ACYPI	J9JMW6	J9K7F0	PX domain-containing protein.	Uncharacterized protein.	0.966
J9JMW6_ACYPI	X1XSM3_ACYPI	J9JMW6	X1XSM3	PX domain-containing protein.	J domain-containing protein.	0.988
J9JX31_ACYPI	J9JMR2_ACYPI	J9JX31	J9JMR2	LsmAD domain-containing protein.	SAC domain-containing protein.	0.637
J9JX31_ACYPI	J9JXI4_ACYPI	J9JX31	J9JXI4	LsmAD domain-containing protein.	Uncharacterized protein.	0.750
J9JX31_ACYPI	J9K3J8_ACYPI	J9JX31	J9K3J8	LsmAD domain-containing protein.	E3 ubiquitin-protein ligase parkin; Functions within a multiprotein E3 ubiquitin ligase complex, catalyzing the covalent attachment of ubiquitin moieties onto substrate proteins; Belongs to the RBR family. Parkin subfamily.	0.639
J9JX31_ACYPI	J9K735_ACYPI	J9JX31	J9K735	LsmAD domain-containing protein.	J domain-containing protein.	0.632
J9JX31_ACYPI	J9K779_ACYPI	J9JX31	J9K779	LsmAD domain-containing protein.	Vacuolar protein sorting-associated protein 35; Plays a role in vesicular protein sorting.	0.628
J9JX31_ACYPI	J9K9P4_ACYPI	J9JX31	J9K9P4	LsmAD domain-containing protein.	Protein kinase domain-containing protein.	0.618
J9JX31_ACYPI	X1XSM3_ACYPI	J9JX31	X1XSM3	LsmAD domain-containing protein.	J domain-containing protein.	0.750
J9JXI4_ACYPI	J9JMR2_ACYPI	J9JXI4	J9JMR2	Uncharacterized protein.	SAC domain-containing protein.	0.746